Gene : Glyma.08G334000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11468:SF4 - ALPHA-GLUCAN PHOSPHORYLASE 2, CYTOSOLIC Genomic Order:  3340
Name:  ? Glyma.08G334000 Secondary Identifier:  ? PAC:30535793
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7238 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G334000 0.5kb upstream 0.5kb upstream 8714 true Chr08: 45141787-45150500 Glycine max
Glyma.08G334000 0.5kb upstream 0.5kb upstream 500 false Chr08: 45141787-45142286 Glycine max
Glyma.08G334000 0.5kb downstream 0.5kb downstream 8714 true Chr08: 45142287-45151000 Glycine max
Glyma.08G334000 0.5kb downstream 0.5kb downstream 500 false Chr08: 45150501-45151000 Glycine max
Glyma.08G334000 1.0kb upstream 1.0kb upstream 9214 true Chr08: 45141287-45150500 Glycine max
Glyma.08G334000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 45141287-45142286 Glycine max
Glyma.08G334000 1.0kb downstream 1.0kb downstream 9214 true Chr08: 45142287-45151500 Glycine max
Glyma.08G334000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 45150501-45151500 Glycine max
Glyma.08G334000 2.0kb upstream 2.0kb upstream 10214 true Chr08: 45140287-45150500 Glycine max
Glyma.08G334000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 45140287-45142286 Glycine max
Glyma.08G334000 2.0kb downstream 2.0kb downstream 10214 true Chr08: 45142287-45152500 Glycine max
Glyma.08G334000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 45150501-45152500 Glycine max
Glyma.08G334000 5.0kb upstream 5.0kb upstream 13214 true Chr08: 45137287-45150500 Glycine max
Glyma.08G334000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 45137287-45142286 Glycine max
Glyma.08G334000 5.0kb downstream 5.0kb downstream 13214 true Chr08: 45142287-45155500 Glycine max
Glyma.08G334000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 45150501-45155500 Glycine max
Glyma.08G334000 10.0kb upstream 10.0kb upstream 18214 true Chr08: 45132287-45150500 Glycine max
Glyma.08G334000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 45132287-45142286 Glycine max
Glyma.08G334000 10.0kb downstream 10.0kb downstream 18214 true Chr08: 45142287-45160500 Glycine max
Glyma.08G334000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 45150501-45160500 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304647 5265 Fabidae View MSA
124069139 5270 Rosid View MSA
123737453 5271 Pentapetalae View MSA
122789907 5272 Eudicot View MSA
122042301 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 82.562 0.0 288.927 High High
cufflinks 18.9515 0.0 52.2152    
cufflinks 39.9399 0.0 121.477 High  
cufflinks 26.1708 0.0 74.7136 High  
cufflinks 10.1319 0.0 27.058   Low
cufflinks 7.4983 0.0 20.0278   Low
cufflinks 26.2863 0.0 74.8523 High  
cufflinks 46.4016 0.0 144.141 High  
cufflinks 11.2379 0.0 30.0823    
cufflinks 6.569        
cufflinks 2.535       Low
cufflinks 11.838     High  
cufflinks 4.093        
cufflinks 3.992        
cufflinks 3.249        
cufflinks 10.018     High  
cufflinks 4.098        
cufflinks 20.405     High High
cufflinks 6.828        
cufflinks 25.041     High High
cufflinks 2.858       Low
cufflinks 20.56     High High
cufflinks 12.361     High  
cufflinks 2.982       Low
cufflinks 15.259     High High
cufflinks 3.518        

0 Strain