Gene : Glyma.08G325700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31791:SF13 - FRIGIDA-LIKE PROTEIN 5 Genomic Order:  3257
Name:  ? Glyma.08G325700 Secondary Identifier:  ? PAC:30539391
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G325700 0.5kb upstream 0.5kb upstream 3722 true Chr08: 44379197-44382918 Glycine max
Glyma.08G325700 0.5kb upstream 0.5kb upstream 500 false Chr08: 44379197-44379696 Glycine max
Glyma.08G325700 0.5kb downstream 0.5kb downstream 3722 true Chr08: 44379697-44383418 Glycine max
Glyma.08G325700 0.5kb downstream 0.5kb downstream 500 false Chr08: 44382919-44383418 Glycine max
Glyma.08G325700 1.0kb upstream 1.0kb upstream 4222 true Chr08: 44378697-44382918 Glycine max
Glyma.08G325700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 44378697-44379696 Glycine max
Glyma.08G325700 1.0kb downstream 1.0kb downstream 4222 true Chr08: 44379697-44383918 Glycine max
Glyma.08G325700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 44382919-44383918 Glycine max
Glyma.08G325700 2.0kb upstream 2.0kb upstream 5222 true Chr08: 44377697-44382918 Glycine max
Glyma.08G325700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 44377697-44379696 Glycine max
Glyma.08G325700 2.0kb downstream 2.0kb downstream 5222 true Chr08: 44379697-44384918 Glycine max
Glyma.08G325700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 44382919-44384918 Glycine max
Glyma.08G325700 5.0kb upstream 5.0kb upstream 8222 true Chr08: 44374697-44382918 Glycine max
Glyma.08G325700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 44374697-44379696 Glycine max
Glyma.08G325700 5.0kb downstream 5.0kb downstream 8222 true Chr08: 44379697-44387918 Glycine max
Glyma.08G325700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 44382919-44387918 Glycine max
Glyma.08G325700 10.0kb upstream 10.0kb upstream 13222 true Chr08: 44369697-44382918 Glycine max
Glyma.08G325700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 44369697-44379696 Glycine max
Glyma.08G325700 10.0kb downstream 10.0kb downstream 13222 true Chr08: 44379697-44392918 Glycine max
Glyma.08G325700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 44382919-44392918 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313510 5265 Fabidae View MSA
124072897 5270 Rosid View MSA
123741015 5271 Pentapetalae View MSA
122795482 5272 Eudicot View MSA
122048785 5273 Angiosperm View MSA
121311111 5274 Embryophyte View MSA
123348454 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.12654 0.0 6.74512   Low
cufflinks 5.19434 0.0 14.6413    
cufflinks 2.0078 0.0 6.41921   Low
cufflinks 5.19797 0.0 14.6463    
cufflinks 4.1243 0.0 11.9174    
cufflinks 2.31867 0.0 7.25181   Low
cufflinks 7.11158 0.0 19.4964   High
cufflinks 3.76961 0.0 11.0215    
cufflinks 3.75382 0.0 10.9766    
cufflinks 2.321        
cufflinks 0.743       Low
cufflinks 2.118        
cufflinks 2.503        
cufflinks 2.948        
cufflinks 0.788       Low
cufflinks 2.511        
cufflinks 0.718       Low
cufflinks 2.711        
cufflinks 3.581       High
cufflinks 2.605        
cufflinks 1.751        
cufflinks 2.576        
cufflinks 2.895        
cufflinks 0.86       Low
cufflinks 2.417        
cufflinks 1.158        

0 Strain