Gene : Glyma.08G328000 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11040//PTHR11040:SF23 - ZINC/IRON TRANSPORTER Genomic Order:  3280
Name:  ? Glyma.08G328000 Secondary Identifier:  ? PAC:30541331
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G328000 0.5kb upstream 0.5kb upstream 3582 true Chr08: 44589948-44593529 Glycine max
Glyma.08G328000 0.5kb upstream 0.5kb upstream 500 false Chr08: 44593030-44593529 Glycine max
Glyma.08G328000 0.5kb downstream 0.5kb downstream 3582 true Chr08: 44589448-44593029 Glycine max
Glyma.08G328000 0.5kb downstream 0.5kb downstream 500 false Chr08: 44589448-44589947 Glycine max
Glyma.08G328000 1.0kb upstream 1.0kb upstream 4082 true Chr08: 44589948-44594029 Glycine max
Glyma.08G328000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 44593030-44594029 Glycine max
Glyma.08G328000 1.0kb downstream 1.0kb downstream 4082 true Chr08: 44588948-44593029 Glycine max
Glyma.08G328000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 44588948-44589947 Glycine max
Glyma.08G328000 2.0kb upstream 2.0kb upstream 5082 true Chr08: 44589948-44595029 Glycine max
Glyma.08G328000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 44593030-44595029 Glycine max
Glyma.08G328000 2.0kb downstream 2.0kb downstream 5082 true Chr08: 44587948-44593029 Glycine max
Glyma.08G328000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 44587948-44589947 Glycine max
Glyma.08G328000 5.0kb upstream 5.0kb upstream 8082 true Chr08: 44589948-44598029 Glycine max
Glyma.08G328000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 44593030-44598029 Glycine max
Glyma.08G328000 5.0kb downstream 5.0kb downstream 8082 true Chr08: 44584948-44593029 Glycine max
Glyma.08G328000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 44584948-44589947 Glycine max
Glyma.08G328000 10.0kb upstream 10.0kb upstream 13082 true Chr08: 44589948-44603029 Glycine max
Glyma.08G328000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 44593030-44603029 Glycine max
Glyma.08G328000 10.0kb downstream 10.0kb downstream 13082 true Chr08: 44579948-44593029 Glycine max
Glyma.08G328000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 44579948-44589947 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303270 5265 Fabidae View MSA
124061308 5270 Rosid View MSA
123739218 5271 Pentapetalae View MSA
122792201 5272 Eudicot View MSA
122044792 5273 Angiosperm View MSA
121349012 5274 Embryophyte View MSA
123428132 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.1666 0.0 30.4214   High
cufflinks 1.09531 0.0 3.90206   Low
cufflinks 4.74201 0.0 14.1508    
cufflinks 1.45397 0.0 5.05848    
cufflinks 2.85543 0.0 9.13061    
cufflinks 2.02202 0.0 6.78087    
cufflinks 1.55465 0.0 5.36273    
cufflinks 11.2594 0.0 30.6622   High
cufflinks 1.4231 0.0 4.9517    
cufflinks 2.217        
cufflinks 3.867       High
cufflinks 0.572       Low
cufflinks 0.573       Low
cufflinks 0.485       Low
cufflinks 0.814        
cufflinks 2.066        
cufflinks 8.07     High High
cufflinks 1.286        
cufflinks 1.197        
cufflinks 1.141        
cufflinks 1.337        
cufflinks 0.833        
cufflinks 0.796        
cufflinks 1.816        
cufflinks 1.24        
cufflinks 3.766       High

0 Strain