Gene : Glyma.08G328600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR34947:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MJG19 Genomic Order:  3286
Name:  ? Glyma.08G328600 Secondary Identifier:  ? PAC:30539047
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G328600 0.5kb upstream 0.5kb upstream 1805 true Chr08: 44640437-44642241 Glycine max
Glyma.08G328600 0.5kb upstream 0.5kb upstream 500 false Chr08: 44640437-44640936 Glycine max
Glyma.08G328600 0.5kb downstream 0.5kb downstream 1805 true Chr08: 44640937-44642741 Glycine max
Glyma.08G328600 0.5kb downstream 0.5kb downstream 500 false Chr08: 44642242-44642741 Glycine max
Glyma.08G328600 1.0kb upstream 1.0kb upstream 2305 true Chr08: 44639937-44642241 Glycine max
Glyma.08G328600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 44639937-44640936 Glycine max
Glyma.08G328600 1.0kb downstream 1.0kb downstream 2305 true Chr08: 44640937-44643241 Glycine max
Glyma.08G328600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 44642242-44643241 Glycine max
Glyma.08G328600 2.0kb upstream 2.0kb upstream 3305 true Chr08: 44638937-44642241 Glycine max
Glyma.08G328600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 44638937-44640936 Glycine max
Glyma.08G328600 2.0kb downstream 2.0kb downstream 3305 true Chr08: 44640937-44644241 Glycine max
Glyma.08G328600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 44642242-44644241 Glycine max
Glyma.08G328600 5.0kb upstream 5.0kb upstream 6305 true Chr08: 44635937-44642241 Glycine max
Glyma.08G328600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 44635937-44640936 Glycine max
Glyma.08G328600 5.0kb downstream 5.0kb downstream 6305 true Chr08: 44640937-44647241 Glycine max
Glyma.08G328600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 44642242-44647241 Glycine max
Glyma.08G328600 10.0kb upstream 10.0kb upstream 11305 true Chr08: 44630937-44642241 Glycine max
Glyma.08G328600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 44630937-44640936 Glycine max
Glyma.08G328600 10.0kb downstream 10.0kb downstream 11305 true Chr08: 44640937-44652241 Glycine max
Glyma.08G328600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 44642242-44652241 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309770 5265 Fabidae View MSA
124070345 5270 Rosid View MSA
123746595 5271 Pentapetalae View MSA
122789663 5272 Eudicot View MSA
122050891 5273 Angiosperm View MSA
121312190 5274 Embryophyte View MSA
123349389 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.07997 0.0 3.90255    
cufflinks 1.04714 0.0 3.78309    
cufflinks 2.89992 0.0 9.44373    
cufflinks 6.08385 0.0 17.9546   High
cufflinks 0.689928 0.0 2.56095    
cufflinks 0.200614 0.0 0.785195 Low Low
cufflinks 0.524362 0.0 1.973    
cufflinks 6.52419 0.0 19.0818   High
cufflinks 1.07978 0.0 3.89797    
cufflinks 2.504       High
cufflinks 0.059       Low
cufflinks 4.796       High
cufflinks 0.892        
cufflinks 0.567        
cufflinks 0.058       Low
cufflinks 1.713        
cufflinks 0.49        
cufflinks 3.122       High
cufflinks 0.556        
cufflinks 0.988        
cufflinks 0.193        
cufflinks 1.137        
cufflinks 0.317        
cufflinks 0.133       Low
cufflinks 2.176        
cufflinks 0.314        

0 Strain