Gene : Glyma.08G329000 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR35708:SF1 - GB Genomic Order:  3290
Name:  ? Glyma.08G329000 Secondary Identifier:  ? PAC:30539011
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G329000 0.5kb upstream 0.5kb upstream 2238 true Chr08: 44675633-44677870 Glycine max
Glyma.08G329000 0.5kb upstream 0.5kb upstream 500 false Chr08: 44675633-44676132 Glycine max
Glyma.08G329000 0.5kb downstream 0.5kb downstream 2238 true Chr08: 44676133-44678370 Glycine max
Glyma.08G329000 0.5kb downstream 0.5kb downstream 500 false Chr08: 44677871-44678370 Glycine max
Glyma.08G329000 1.0kb upstream 1.0kb upstream 2738 true Chr08: 44675133-44677870 Glycine max
Glyma.08G329000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 44675133-44676132 Glycine max
Glyma.08G329000 1.0kb downstream 1.0kb downstream 2738 true Chr08: 44676133-44678870 Glycine max
Glyma.08G329000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 44677871-44678870 Glycine max
Glyma.08G329000 2.0kb upstream 2.0kb upstream 3738 true Chr08: 44674133-44677870 Glycine max
Glyma.08G329000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 44674133-44676132 Glycine max
Glyma.08G329000 2.0kb downstream 2.0kb downstream 3738 true Chr08: 44676133-44679870 Glycine max
Glyma.08G329000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 44677871-44679870 Glycine max
Glyma.08G329000 5.0kb upstream 5.0kb upstream 6738 true Chr08: 44671133-44677870 Glycine max
Glyma.08G329000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 44671133-44676132 Glycine max
Glyma.08G329000 5.0kb downstream 5.0kb downstream 6738 true Chr08: 44676133-44682870 Glycine max
Glyma.08G329000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 44677871-44682870 Glycine max
Glyma.08G329000 10.0kb upstream 10.0kb upstream 11738 true Chr08: 44666133-44677870 Glycine max
Glyma.08G329000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 44666133-44676132 Glycine max
Glyma.08G329000 10.0kb downstream 10.0kb downstream 11738 true Chr08: 44676133-44687870 Glycine max
Glyma.08G329000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 44677871-44687870 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298594 5265 Fabidae View MSA
124070540 5270 Rosid View MSA
123748172 5271 Pentapetalae View MSA
122794330 5272 Eudicot View MSA
122044423 5273 Angiosperm View MSA
121310293 5274 Embryophyte View MSA
123347819 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.593762 0.0 2.18793    
cufflinks 2.09069 0.0 6.91696   High
cufflinks 0.306059 0.0 1.16074   Low
cufflinks 0.260331 0.0 0.995071   Low
cufflinks 1.71564 0.0 5.84945    
cufflinks 1.41469 0.0 4.90692    
cufflinks 2.31335 0.0 7.60114   High
cufflinks 0.543639 0.0 2.00912    
cufflinks 1.13758 0.0 4.01691    
cufflinks 0.304        
cufflinks 0.182       Low
cufflinks 0.725        
cufflinks 2.063        
cufflinks 2.976        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.786       High
cufflinks 0.169       Low
cufflinks 0.927        
cufflinks 2.021        
cufflinks 6.389       High
cufflinks 0.204       Low
cufflinks 6.744       High
cufflinks 3.505        
cufflinks 0.306        
cufflinks 5.856       High
cufflinks 0.269       Low

0 Strain