Gene : Glyma.08G315100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12854//PTHR12854:SF12 - ATAXIN 2-RELATED Genomic Order:  3151
Name:  ? Glyma.08G315100 Secondary Identifier:  ? PAC:30535874
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G315100 0.5kb upstream 0.5kb upstream 8717 true Chr08: 43502620-43511336 Glycine max
Glyma.08G315100 0.5kb upstream 0.5kb upstream 500 false Chr08: 43502620-43503119 Glycine max
Glyma.08G315100 0.5kb downstream 0.5kb downstream 8717 true Chr08: 43503120-43511836 Glycine max
Glyma.08G315100 0.5kb downstream 0.5kb downstream 500 false Chr08: 43511337-43511836 Glycine max
Glyma.08G315100 1.0kb upstream 1.0kb upstream 9217 true Chr08: 43502120-43511336 Glycine max
Glyma.08G315100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 43502120-43503119 Glycine max
Glyma.08G315100 1.0kb downstream 1.0kb downstream 9217 true Chr08: 43503120-43512336 Glycine max
Glyma.08G315100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 43511337-43512336 Glycine max
Glyma.08G315100 2.0kb upstream 2.0kb upstream 10217 true Chr08: 43501120-43511336 Glycine max
Glyma.08G315100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 43501120-43503119 Glycine max
Glyma.08G315100 2.0kb downstream 2.0kb downstream 10217 true Chr08: 43503120-43513336 Glycine max
Glyma.08G315100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 43511337-43513336 Glycine max
Glyma.08G315100 5.0kb upstream 5.0kb upstream 13217 true Chr08: 43498120-43511336 Glycine max
Glyma.08G315100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 43498120-43503119 Glycine max
Glyma.08G315100 5.0kb downstream 5.0kb downstream 13217 true Chr08: 43503120-43516336 Glycine max
Glyma.08G315100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 43511337-43516336 Glycine max
Glyma.08G315100 10.0kb upstream 10.0kb upstream 18217 true Chr08: 43493120-43511336 Glycine max
Glyma.08G315100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 43493120-43503119 Glycine max
Glyma.08G315100 10.0kb downstream 10.0kb downstream 18217 true Chr08: 43503120-43521336 Glycine max
Glyma.08G315100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 43511337-43521336 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299902 5265 Fabidae View MSA
124064647 5270 Rosid View MSA
123736552 5271 Pentapetalae View MSA
122787256 5272 Eudicot View MSA
122047595 5273 Angiosperm View MSA
121310768 5274 Embryophyte View MSA
123348174 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.48531 0.0 13.3067    
cufflinks 2.82257 0.0 13.5931   Low
cufflinks 3.37055 0.0 18.3347    
cufflinks 3.9515 0.0 16.9322    
cufflinks 4.04049 0.0 21.8867    
cufflinks 4.36871 0.0 22.6066    
cufflinks 4.77372 0.0 22.7928   High
cufflinks 4.27109 0.0 21.2959    
cufflinks 3.55993 0.0 20.5799    
cufflinks 0.403       High
cufflinks 0.194       Low
cufflinks 0.266        
cufflinks 0.312        
cufflinks 0.439       High
cufflinks 0.29        
cufflinks 0.197       Low
cufflinks 0.363       High
cufflinks 0.314        
cufflinks 0.24        
cufflinks 0.21        
cufflinks 0.248        
cufflinks 0.215        
cufflinks 0.233        
cufflinks 0.264        
cufflinks 0.171       Low
cufflinks 0.321        

0 Strain