Gene : Glyma.08G316400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR14155//PTHR14155:SF176 - RING FINGER DOMAIN-CONTAINING Genomic Order:  3164
Name:  ? Glyma.08G316400 Secondary Identifier:  ? PAC:30538215
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G316400 0.5kb upstream 0.5kb upstream 2732 true Chr08: 43627406-43630137 Glycine max
Glyma.08G316400 0.5kb upstream 0.5kb upstream 500 false Chr08: 43629638-43630137 Glycine max
Glyma.08G316400 0.5kb downstream 0.5kb downstream 2732 true Chr08: 43626906-43629637 Glycine max
Glyma.08G316400 0.5kb downstream 0.5kb downstream 500 false Chr08: 43626906-43627405 Glycine max
Glyma.08G316400 1.0kb upstream 1.0kb upstream 3232 true Chr08: 43627406-43630637 Glycine max
Glyma.08G316400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 43629638-43630637 Glycine max
Glyma.08G316400 1.0kb downstream 1.0kb downstream 3232 true Chr08: 43626406-43629637 Glycine max
Glyma.08G316400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 43626406-43627405 Glycine max
Glyma.08G316400 2.0kb upstream 2.0kb upstream 4232 true Chr08: 43627406-43631637 Glycine max
Glyma.08G316400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 43629638-43631637 Glycine max
Glyma.08G316400 2.0kb downstream 2.0kb downstream 4232 true Chr08: 43625406-43629637 Glycine max
Glyma.08G316400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 43625406-43627405 Glycine max
Glyma.08G316400 5.0kb upstream 5.0kb upstream 7232 true Chr08: 43627406-43634637 Glycine max
Glyma.08G316400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 43629638-43634637 Glycine max
Glyma.08G316400 5.0kb downstream 5.0kb downstream 7232 true Chr08: 43622406-43629637 Glycine max
Glyma.08G316400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 43622406-43627405 Glycine max
Glyma.08G316400 10.0kb upstream 10.0kb upstream 12232 true Chr08: 43627406-43639637 Glycine max
Glyma.08G316400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 43629638-43639637 Glycine max
Glyma.08G316400 10.0kb downstream 10.0kb downstream 12232 true Chr08: 43617406-43629637 Glycine max
Glyma.08G316400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 43617406-43627405 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791916 5273 Angiosperm View MSA
122254114 5265 Fabidae View MSA
124064654 5270 Rosid View MSA
123747465 5271 Pentapetalae View MSA
122795286 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121063185 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0335389 0.0 0.170736 Low Low
cufflinks 12.3157 0.0 51.757   High
cufflinks 2.75868 0.0 15.5903    
cufflinks 0.860024 0.0 5.98869    
cufflinks 0.453289 0.0 3.22201    
cufflinks 0.700355 0.0 3.49226    
cufflinks 0.0866635 0.0 0.363531 Low Low
cufflinks 1.08264 0.0 5.23947    
cufflinks 0.20062 0.0 0.799899 Low  
cufflinks 0.455        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.267        
cufflinks 0.237        
cufflinks 0.198        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.373        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.765       High
cufflinks 1.491        
cufflinks 2.095        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.874        
cufflinks 0.413        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.824        
cufflinks 0.012     Low Low

0 Strain