Gene : Glyma.08G317000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12910:SF1 - NADH:UBIQUINONE OXIDOREDUCTASE SUBUNIT-17.2 Genomic Order:  3170
Name:  ? Glyma.08G317000 Secondary Identifier:  ? PAC:30540376
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G317000 0.5kb upstream 0.5kb upstream 5606 true Chr08: 43669997-43675602 Glycine max
Glyma.08G317000 0.5kb upstream 0.5kb upstream 500 false Chr08: 43675103-43675602 Glycine max
Glyma.08G317000 0.5kb downstream 0.5kb downstream 5606 true Chr08: 43669497-43675102 Glycine max
Glyma.08G317000 0.5kb downstream 0.5kb downstream 500 false Chr08: 43669497-43669996 Glycine max
Glyma.08G317000 1.0kb upstream 1.0kb upstream 6106 true Chr08: 43669997-43676102 Glycine max
Glyma.08G317000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 43675103-43676102 Glycine max
Glyma.08G317000 1.0kb downstream 1.0kb downstream 6106 true Chr08: 43668997-43675102 Glycine max
Glyma.08G317000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 43668997-43669996 Glycine max
Glyma.08G317000 2.0kb upstream 2.0kb upstream 7106 true Chr08: 43669997-43677102 Glycine max
Glyma.08G317000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 43675103-43677102 Glycine max
Glyma.08G317000 2.0kb downstream 2.0kb downstream 7106 true Chr08: 43667997-43675102 Glycine max
Glyma.08G317000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 43667997-43669996 Glycine max
Glyma.08G317000 5.0kb upstream 5.0kb upstream 10106 true Chr08: 43669997-43680102 Glycine max
Glyma.08G317000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 43675103-43680102 Glycine max
Glyma.08G317000 5.0kb downstream 5.0kb downstream 10106 true Chr08: 43664997-43675102 Glycine max
Glyma.08G317000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 43664997-43669996 Glycine max
Glyma.08G317000 10.0kb upstream 10.0kb upstream 15106 true Chr08: 43669997-43685102 Glycine max
Glyma.08G317000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 43675103-43685102 Glycine max
Glyma.08G317000 10.0kb downstream 10.0kb downstream 15106 true Chr08: 43659997-43675102 Glycine max
Glyma.08G317000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 43659997-43669996 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303740 5265 Fabidae View MSA
124068479 5270 Rosid View MSA
123736491 5271 Pentapetalae View MSA
122790049 5272 Eudicot View MSA
122041716 5273 Angiosperm View MSA
121346222 5274 Embryophyte View MSA
123424821 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.38472 0.0 13.7545    
cufflinks 3.08457 0.0 10.1558   Low
cufflinks 4.26184 0.0 13.3633    
cufflinks 4.16994 0.0 13.1216    
cufflinks 3.78722 0.0 12.1321    
cufflinks 5.59008 0.0 16.9391    
cufflinks 2.42838 0.0 8.25039   Low
cufflinks 7.00102 0.0 20.5046   High
cufflinks 4.79623 0.0 14.8417    
cufflinks 0.362        
cufflinks 0.181       Low
cufflinks 0.857       High
cufflinks 0.653       High
cufflinks 0.775       High
cufflinks 0.286        
cufflinks 0.26        
cufflinks 0.237        
cufflinks 0.607       High
cufflinks 0.34        
cufflinks 0.259        
cufflinks 0.254        
cufflinks 0.294        
cufflinks 0.278        
cufflinks 0.268        
cufflinks 0.247        
cufflinks 0.292        

0 Strain