Gene : Glyma.08G318500 G. max Wm82.a2.v1
Defline:  (1 of 3) PF14780 - Domain of unknown function (DUF4477) (DUF4477) Genomic Order:  3185
Name:  ? Glyma.08G318500 Secondary Identifier:  ? PAC:30539120
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G318500 0.5kb upstream 0.5kb upstream 4325 true Chr08: 43780079-43784403 Glycine max
Glyma.08G318500 0.5kb upstream 0.5kb upstream 500 false Chr08: 43780079-43780578 Glycine max
Glyma.08G318500 0.5kb downstream 0.5kb downstream 4325 true Chr08: 43780579-43784903 Glycine max
Glyma.08G318500 0.5kb downstream 0.5kb downstream 500 false Chr08: 43784404-43784903 Glycine max
Glyma.08G318500 1.0kb upstream 1.0kb upstream 4825 true Chr08: 43779579-43784403 Glycine max
Glyma.08G318500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 43779579-43780578 Glycine max
Glyma.08G318500 1.0kb downstream 1.0kb downstream 4825 true Chr08: 43780579-43785403 Glycine max
Glyma.08G318500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 43784404-43785403 Glycine max
Glyma.08G318500 2.0kb upstream 2.0kb upstream 5825 true Chr08: 43778579-43784403 Glycine max
Glyma.08G318500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 43778579-43780578 Glycine max
Glyma.08G318500 2.0kb downstream 2.0kb downstream 5825 true Chr08: 43780579-43786403 Glycine max
Glyma.08G318500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 43784404-43786403 Glycine max
Glyma.08G318500 5.0kb upstream 5.0kb upstream 8825 true Chr08: 43775579-43784403 Glycine max
Glyma.08G318500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 43775579-43780578 Glycine max
Glyma.08G318500 5.0kb downstream 5.0kb downstream 8825 true Chr08: 43780579-43789403 Glycine max
Glyma.08G318500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 43784404-43789403 Glycine max
Glyma.08G318500 10.0kb upstream 10.0kb upstream 13825 true Chr08: 43770579-43784403 Glycine max
Glyma.08G318500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 43770579-43780578 Glycine max
Glyma.08G318500 10.0kb downstream 10.0kb downstream 13825 true Chr08: 43780579-43794403 Glycine max
Glyma.08G318500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 43784404-43794403 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121614344 5273 Angiosperm Singleton cluster - no MSA
122248730 5265 Fabidae Singleton cluster - no MSA
123992271 5270 Rosid Singleton cluster - no MSA
123567151 5271 Pentapetalae Singleton cluster - no MSA
122601903 5272 Eudicot Singleton cluster - no MSA
120886551 5274 Embryophyte Singleton cluster - no MSA
122927320 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.547543 0.0 10.7564    
cufflinks 0.681688 0.0 11.6091   High
cufflinks 0.636289 0.0 8.61573    
cufflinks 0.467397 0.0 7.29943    
cufflinks 0.532803 0.0 9.57549    
cufflinks 0.329524 0.0 5.97183   Low
cufflinks 0.587526 0.0 9.15956    
cufflinks 0.593014 0.0 8.86658    
cufflinks 0.543346 0.0 9.00252    
cufflinks 0.136        
cufflinks 0.034     Low Low
cufflinks 0.33       High
cufflinks 0.221        
cufflinks 0.296        
cufflinks 0.156        
cufflinks 0.215        
cufflinks 0.043     Low Low
cufflinks 0.404       High
cufflinks 0.277        
cufflinks 0.134        
cufflinks 0.072        
cufflinks 0.128        
cufflinks 0.16        
cufflinks 0.026     Low Low
cufflinks 0.195        
cufflinks 0.109        

0 Strain