Gene : Glyma.08G319900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10146 - PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN Genomic Order:  3199
Name:  ? Glyma.08G319900 Secondary Identifier:  ? PAC:30539658
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G319900 0.5kb upstream 0.5kb upstream 4538 true Chr08: 43899217-43903754 Glycine max
Glyma.08G319900 0.5kb upstream 0.5kb upstream 500 false Chr08: 43903255-43903754 Glycine max
Glyma.08G319900 0.5kb downstream 0.5kb downstream 4538 true Chr08: 43898717-43903254 Glycine max
Glyma.08G319900 0.5kb downstream 0.5kb downstream 500 false Chr08: 43898717-43899216 Glycine max
Glyma.08G319900 1.0kb upstream 1.0kb upstream 5038 true Chr08: 43899217-43904254 Glycine max
Glyma.08G319900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 43903255-43904254 Glycine max
Glyma.08G319900 1.0kb downstream 1.0kb downstream 5038 true Chr08: 43898217-43903254 Glycine max
Glyma.08G319900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 43898217-43899216 Glycine max
Glyma.08G319900 2.0kb upstream 2.0kb upstream 6038 true Chr08: 43899217-43905254 Glycine max
Glyma.08G319900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 43903255-43905254 Glycine max
Glyma.08G319900 2.0kb downstream 2.0kb downstream 6038 true Chr08: 43897217-43903254 Glycine max
Glyma.08G319900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 43897217-43899216 Glycine max
Glyma.08G319900 5.0kb upstream 5.0kb upstream 9038 true Chr08: 43899217-43908254 Glycine max
Glyma.08G319900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 43903255-43908254 Glycine max
Glyma.08G319900 5.0kb downstream 5.0kb downstream 9038 true Chr08: 43894217-43903254 Glycine max
Glyma.08G319900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 43894217-43899216 Glycine max
Glyma.08G319900 10.0kb upstream 10.0kb upstream 14038 true Chr08: 43899217-43913254 Glycine max
Glyma.08G319900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 43903255-43913254 Glycine max
Glyma.08G319900 10.0kb downstream 10.0kb downstream 14038 true Chr08: 43889217-43903254 Glycine max
Glyma.08G319900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 43889217-43899216 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307915 5265 Fabidae View MSA
124066747 5270 Rosid View MSA
123741353 5271 Pentapetalae View MSA
122795077 5272 Eudicot View MSA
122042316 5273 Angiosperm View MSA
121344237 5274 Embryophyte View MSA
123424021 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.8058 0.0 157.621 High High
cufflinks 11.6141 0.0 43.8789    
cufflinks 11.2489 0.0 43.1915    
cufflinks 12.7808 0.0 47.5941    
cufflinks 7.66925 0.0 33.5676    
cufflinks 6.4018 0.0 19.247   Low
cufflinks 8.88716 0.0 31.2251    
cufflinks 12.3312 0.0 46.1599    
cufflinks 11.2646 0.0 42.6067    
cufflinks 1.214        
cufflinks 0.494       Low
cufflinks 1.03        
cufflinks 0.483       Low
cufflinks 0.547       Low
cufflinks 1.628        
cufflinks 2.3       High
cufflinks 0.565       Low
cufflinks 1.381        
cufflinks 1.243        
cufflinks 2.307       High
cufflinks 0.573        
cufflinks 2.484       High
cufflinks 1.987        
cufflinks 0.569        
cufflinks 2.298       High
cufflinks 0.584        

0 Strain