Gene : Glyma.08G308600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12526:SF360 - SUCROSE-PHOSPHATE SYNTHASE 3-RELATED Genomic Order:  3086
Name:  ? Glyma.08G308600 Secondary Identifier:  ? PAC:30537975
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7238 Glycine max pathologic  
Gmax SUCSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G308600 0.5kb upstream 0.5kb upstream 7554 true Chr08: 42723900-42731453 Glycine max
Glyma.08G308600 0.5kb upstream 0.5kb upstream 500 false Chr08: 42723900-42724399 Glycine max
Glyma.08G308600 0.5kb downstream 0.5kb downstream 7554 true Chr08: 42724400-42731953 Glycine max
Glyma.08G308600 0.5kb downstream 0.5kb downstream 500 false Chr08: 42731454-42731953 Glycine max
Glyma.08G308600 1.0kb upstream 1.0kb upstream 8054 true Chr08: 42723400-42731453 Glycine max
Glyma.08G308600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 42723400-42724399 Glycine max
Glyma.08G308600 1.0kb downstream 1.0kb downstream 8054 true Chr08: 42724400-42732453 Glycine max
Glyma.08G308600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 42731454-42732453 Glycine max
Glyma.08G308600 2.0kb upstream 2.0kb upstream 9054 true Chr08: 42722400-42731453 Glycine max
Glyma.08G308600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 42722400-42724399 Glycine max
Glyma.08G308600 2.0kb downstream 2.0kb downstream 9054 true Chr08: 42724400-42733453 Glycine max
Glyma.08G308600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 42731454-42733453 Glycine max
Glyma.08G308600 5.0kb upstream 5.0kb upstream 12054 true Chr08: 42719400-42731453 Glycine max
Glyma.08G308600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 42719400-42724399 Glycine max
Glyma.08G308600 5.0kb downstream 5.0kb downstream 12054 true Chr08: 42724400-42736453 Glycine max
Glyma.08G308600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 42731454-42736453 Glycine max
Glyma.08G308600 10.0kb upstream 10.0kb upstream 17054 true Chr08: 42714400-42731453 Glycine max
Glyma.08G308600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 42714400-42724399 Glycine max
Glyma.08G308600 10.0kb downstream 10.0kb downstream 17054 true Chr08: 42724400-42741453 Glycine max
Glyma.08G308600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 42731454-42741453 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299377 5265 Fabidae View MSA
124060783 5270 Rosid View MSA
123737048 5271 Pentapetalae View MSA
122785600 5272 Eudicot View MSA
122049216 5273 Angiosperm View MSA
121347172 5274 Embryophyte View MSA
123427859 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.96727 0.0 18.5893   High
cufflinks 0.14425 0.0 0.541797 Low  
cufflinks 0.182263 0.0 0.675924 Low  
cufflinks 0.241251 0.0 0.882049    
cufflinks 0.545628 0.0 1.88082    
cufflinks 0.406378 0.0 1.43628    
cufflinks 0.118018 0.0 0.447325 Low  
cufflinks 0.0474291 0.0 0.186555 Low Low
cufflinks 0.0890303 0.0 0.341583 Low  
cufflinks 0.045     Low  
cufflinks 0.026     Low  
cufflinks 0.288        
cufflinks 0.219        
cufflinks 0.304        
cufflinks 0.005     Low Low
cufflinks 0.405        
cufflinks 0.027     Low  
cufflinks 1.535       High
cufflinks 0.066     Low  
cufflinks 0.338        
cufflinks 0.023     Low Low
cufflinks 0.498        
cufflinks 0.261        
cufflinks 0.033     Low  
cufflinks 0.609       High
cufflinks 0.037     Low  

0 Strain