Gene : Glyma.08G309300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10210:SF34 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 4 Genomic Order:  3093
Name:  ? Glyma.08G309300 Secondary Identifier:  ? PAC:30540826
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-662 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G309300 0.5kb upstream 0.5kb upstream 4800 true Chr08: 42831278-42836077 Glycine max
Glyma.08G309300 0.5kb upstream 0.5kb upstream 500 false Chr08: 42831278-42831777 Glycine max
Glyma.08G309300 0.5kb downstream 0.5kb downstream 4800 true Chr08: 42831778-42836577 Glycine max
Glyma.08G309300 0.5kb downstream 0.5kb downstream 500 false Chr08: 42836078-42836577 Glycine max
Glyma.08G309300 1.0kb upstream 1.0kb upstream 5300 true Chr08: 42830778-42836077 Glycine max
Glyma.08G309300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 42830778-42831777 Glycine max
Glyma.08G309300 1.0kb downstream 1.0kb downstream 5300 true Chr08: 42831778-42837077 Glycine max
Glyma.08G309300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 42836078-42837077 Glycine max
Glyma.08G309300 2.0kb upstream 2.0kb upstream 6300 true Chr08: 42829778-42836077 Glycine max
Glyma.08G309300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 42829778-42831777 Glycine max
Glyma.08G309300 2.0kb downstream 2.0kb downstream 6300 true Chr08: 42831778-42838077 Glycine max
Glyma.08G309300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 42836078-42838077 Glycine max
Glyma.08G309300 5.0kb upstream 5.0kb upstream 9300 true Chr08: 42826778-42836077 Glycine max
Glyma.08G309300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 42826778-42831777 Glycine max
Glyma.08G309300 5.0kb downstream 5.0kb downstream 9300 true Chr08: 42831778-42841077 Glycine max
Glyma.08G309300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 42836078-42841077 Glycine max
Glyma.08G309300 10.0kb upstream 10.0kb upstream 14300 true Chr08: 42821778-42836077 Glycine max
Glyma.08G309300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 42821778-42831777 Glycine max
Glyma.08G309300 10.0kb downstream 10.0kb downstream 14300 true Chr08: 42831778-42846077 Glycine max
Glyma.08G309300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 42836078-42846077 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299251 5265 Fabidae View MSA
124063296 5270 Rosid View MSA
123738822 5271 Pentapetalae View MSA
122786228 5272 Eudicot View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2605 0.0 46.2399    
cufflinks 24.6008 0.0 92.3605 High High
cufflinks 16.4812 0.0 64.4449    
cufflinks 20.7966 0.0 73.666 High  
cufflinks 15.5787 0.0 54.007    
cufflinks 11.8588 0.0 47.3709   Low
cufflinks 26.1332 0.0 102.47 High High
cufflinks 14.1876 0.0 55.7344    
cufflinks 16.8861 0.0 57.1591    
cufflinks 1.441        
cufflinks 0.645       Low
cufflinks 1.939        
cufflinks 1.467        
cufflinks 1.733        
cufflinks 0.741        
cufflinks 1.302        
cufflinks 0.873        
cufflinks 2.486       High
cufflinks 2.092       High
cufflinks 1.55        
cufflinks 0.506       Low
cufflinks 1.461        
cufflinks 1.675        
cufflinks 0.491       Low
cufflinks 1.486        
cufflinks 0.834        

0 Strain