Gene : Glyma.08G310100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Genomic Order:  3101
Name:  ? Glyma.08G310100 Secondary Identifier:  ? PAC:30539896
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G310100 0.5kb upstream 0.5kb upstream 9914 true Chr08: 42948545-42958458 Glycine max
Glyma.08G310100 0.5kb upstream 0.5kb upstream 500 false Chr08: 42957959-42958458 Glycine max
Glyma.08G310100 0.5kb downstream 0.5kb downstream 9914 true Chr08: 42948045-42957958 Glycine max
Glyma.08G310100 0.5kb downstream 0.5kb downstream 500 false Chr08: 42948045-42948544 Glycine max
Glyma.08G310100 1.0kb upstream 1.0kb upstream 10414 true Chr08: 42948545-42958958 Glycine max
Glyma.08G310100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 42957959-42958958 Glycine max
Glyma.08G310100 1.0kb downstream 1.0kb downstream 10414 true Chr08: 42947545-42957958 Glycine max
Glyma.08G310100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 42947545-42948544 Glycine max
Glyma.08G310100 2.0kb upstream 2.0kb upstream 11414 true Chr08: 42948545-42959958 Glycine max
Glyma.08G310100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 42957959-42959958 Glycine max
Glyma.08G310100 2.0kb downstream 2.0kb downstream 11414 true Chr08: 42946545-42957958 Glycine max
Glyma.08G310100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 42946545-42948544 Glycine max
Glyma.08G310100 5.0kb upstream 5.0kb upstream 14414 true Chr08: 42948545-42962958 Glycine max
Glyma.08G310100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 42957959-42962958 Glycine max
Glyma.08G310100 5.0kb downstream 5.0kb downstream 14414 true Chr08: 42943545-42957958 Glycine max
Glyma.08G310100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 42943545-42948544 Glycine max
Glyma.08G310100 10.0kb upstream 10.0kb upstream 19414 true Chr08: 42948545-42967958 Glycine max
Glyma.08G310100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 42957959-42967958 Glycine max
Glyma.08G310100 10.0kb downstream 10.0kb downstream 19414 true Chr08: 42938545-42957958 Glycine max
Glyma.08G310100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 42938545-42948544 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307292 5265 Fabidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 20.3474 0.0 97.4755 High  
cufflinks 103.461 0.0 621.216 High  
cufflinks 0.0167568 0.0 0.113161 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 92.3478 0.0 511.693 High  
cufflinks 0.195163 0.0 0.766107 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.502       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.496       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low  
cufflinks 0.001     Low  
cufflinks 0.001     Low  
cufflinks 0.001     Low  
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain