Gene : Glyma.08G311200 G. max Wm82.a2.v1
Defline:  (1 of 6) 2.3.3.1 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) Genomic Order:  3112
Name:  ? Glyma.08G311200 Secondary Identifier:  ? PAC:30540183
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLYOXYLATE-BYPASS Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  
Gmax PWY-6549 Glycine max pathologic  

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G311200 0.5kb upstream 0.5kb upstream 8228 true Chr08: 43045840-43054067 Glycine max
Glyma.08G311200 0.5kb upstream 0.5kb upstream 500 false Chr08: 43045840-43046339 Glycine max
Glyma.08G311200 0.5kb downstream 0.5kb downstream 8228 true Chr08: 43046340-43054567 Glycine max
Glyma.08G311200 0.5kb downstream 0.5kb downstream 500 false Chr08: 43054068-43054567 Glycine max
Glyma.08G311200 1.0kb upstream 1.0kb upstream 8728 true Chr08: 43045340-43054067 Glycine max
Glyma.08G311200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 43045340-43046339 Glycine max
Glyma.08G311200 1.0kb downstream 1.0kb downstream 8728 true Chr08: 43046340-43055067 Glycine max
Glyma.08G311200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 43054068-43055067 Glycine max
Glyma.08G311200 2.0kb upstream 2.0kb upstream 9728 true Chr08: 43044340-43054067 Glycine max
Glyma.08G311200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 43044340-43046339 Glycine max
Glyma.08G311200 2.0kb downstream 2.0kb downstream 9728 true Chr08: 43046340-43056067 Glycine max
Glyma.08G311200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 43054068-43056067 Glycine max
Glyma.08G311200 5.0kb upstream 5.0kb upstream 12728 true Chr08: 43041340-43054067 Glycine max
Glyma.08G311200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 43041340-43046339 Glycine max
Glyma.08G311200 5.0kb downstream 5.0kb downstream 12728 true Chr08: 43046340-43059067 Glycine max
Glyma.08G311200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 43054068-43059067 Glycine max
Glyma.08G311200 10.0kb upstream 10.0kb upstream 17728 true Chr08: 43036340-43054067 Glycine max
Glyma.08G311200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 43036340-43046339 Glycine max
Glyma.08G311200 10.0kb downstream 10.0kb downstream 17728 true Chr08: 43046340-43064067 Glycine max
Glyma.08G311200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 43054068-43064067 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309645 5265 Fabidae View MSA
124065792 5270 Rosid View MSA
123748183 5271 Pentapetalae View MSA
122794190 5272 Eudicot View MSA
122044026 5273 Angiosperm View MSA
121344650 5274 Embryophyte View MSA
123424100 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2719 0.0 35.4584    
cufflinks 11.8425 0.0 31.7158   Low
cufflinks 26.9974 0.0 73.2335 High  
cufflinks 25.1178 0.0 67.8342 High  
cufflinks 20.5706 0.0 55.1093 High  
cufflinks 71.432 0.0 216.424 High High
cufflinks 17.6121 0.0 47.0179    
cufflinks 17.5339 0.0 46.8232    
cufflinks 21.1569 0.0 56.7514 High  
cufflinks 16.474     High High
cufflinks 8.164     High  
cufflinks 8.974     High  
cufflinks 6.812        
cufflinks 4.419        
cufflinks 6.436     High  
cufflinks 2.976       Low
cufflinks 32.85     High High
cufflinks 6.436        
cufflinks 5.344        
cufflinks 2.359       Low
cufflinks 7.387     High  
cufflinks 2.815       Low
cufflinks 5.93        
cufflinks 10.386     High  
cufflinks 2.278       Low
cufflinks 11.874     High  

0 Strain