Gene : Glyma.08G311300 G. max Wm82.a2.v1
Defline:  (1 of 1) PF06881 - RNA polymerase II transcription factor SIII (Elongin) subunit A (Elongin_A) Genomic Order:  3113
Name:  ? Glyma.08G311300 Secondary Identifier:  ? PAC:30535913
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G311300 0.5kb upstream 0.5kb upstream 4161 true Chr08: 43059298-43063458 Glycine max
Glyma.08G311300 0.5kb upstream 0.5kb upstream 500 false Chr08: 43062959-43063458 Glycine max
Glyma.08G311300 0.5kb downstream 0.5kb downstream 4161 true Chr08: 43058798-43062958 Glycine max
Glyma.08G311300 0.5kb downstream 0.5kb downstream 500 false Chr08: 43058798-43059297 Glycine max
Glyma.08G311300 1.0kb upstream 1.0kb upstream 4661 true Chr08: 43059298-43063958 Glycine max
Glyma.08G311300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 43062959-43063958 Glycine max
Glyma.08G311300 1.0kb downstream 1.0kb downstream 4661 true Chr08: 43058298-43062958 Glycine max
Glyma.08G311300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 43058298-43059297 Glycine max
Glyma.08G311300 2.0kb upstream 2.0kb upstream 5661 true Chr08: 43059298-43064958 Glycine max
Glyma.08G311300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 43062959-43064958 Glycine max
Glyma.08G311300 2.0kb downstream 2.0kb downstream 5661 true Chr08: 43057298-43062958 Glycine max
Glyma.08G311300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 43057298-43059297 Glycine max
Glyma.08G311300 5.0kb upstream 5.0kb upstream 8661 true Chr08: 43059298-43067958 Glycine max
Glyma.08G311300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 43062959-43067958 Glycine max
Glyma.08G311300 5.0kb downstream 5.0kb downstream 8661 true Chr08: 43054298-43062958 Glycine max
Glyma.08G311300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 43054298-43059297 Glycine max
Glyma.08G311300 10.0kb upstream 10.0kb upstream 13661 true Chr08: 43059298-43072958 Glycine max
Glyma.08G311300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 43062959-43072958 Glycine max
Glyma.08G311300 10.0kb downstream 10.0kb downstream 13661 true Chr08: 43049298-43062958 Glycine max
Glyma.08G311300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 43049298-43059297 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305836 5265 Fabidae View MSA
124061122 5270 Rosid View MSA
123737444 5271 Pentapetalae View MSA
122789909 5272 Eudicot View MSA
122045966 5273 Angiosperm View MSA
121349001 5274 Embryophyte View MSA
123425907 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.5324 0.0 107.113 High  
cufflinks 20.6344 0.0 67.8512 High Low
cufflinks 43.173 0.0 145.344 High  
cufflinks 39.3229 0.0 131.415 High  
cufflinks 30.8878 0.0 100.996 High  
cufflinks 71.889 0.0 266.115 High High
cufflinks 26.9592 0.0 88.252 High  
cufflinks 40.914 0.0 136.282 High  
cufflinks 31.648 0.0 103.316 High  
cufflinks 6.516        
cufflinks 7.603     High High
cufflinks 7.01        
cufflinks 6.769        
cufflinks 5.384        
cufflinks 5.194     High  
cufflinks 5.257        
cufflinks 6.443     High  
cufflinks 7.475     High  
cufflinks 3.973       Low
cufflinks 5.807        
cufflinks 6.333     High  
cufflinks 5.915        
cufflinks 3.661       Low
cufflinks 8.741     High High
cufflinks 5.331        
cufflinks 7.519     High  

0 Strain