Gene : Glyma.08G361500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12741:SF21 - CALLOSE SYNTHASE 3 Genomic Order:  3615
Name:  ? Glyma.08G361500 Secondary Identifier:  ? PAC:30539223
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6773 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G361500 0.5kb upstream 0.5kb upstream 24454 true Chr08: 47300299-47324752 Glycine max
Glyma.08G361500 0.5kb upstream 0.5kb upstream 500 false Chr08: 47324253-47324752 Glycine max
Glyma.08G361500 0.5kb downstream 0.5kb downstream 24454 true Chr08: 47299799-47324252 Glycine max
Glyma.08G361500 0.5kb downstream 0.5kb downstream 500 false Chr08: 47299799-47300298 Glycine max
Glyma.08G361500 1.0kb upstream 1.0kb upstream 24954 true Chr08: 47300299-47325252 Glycine max
Glyma.08G361500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 47324253-47325252 Glycine max
Glyma.08G361500 1.0kb downstream 1.0kb downstream 24954 true Chr08: 47299299-47324252 Glycine max
Glyma.08G361500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 47299299-47300298 Glycine max
Glyma.08G361500 2.0kb upstream 2.0kb upstream 25954 true Chr08: 47300299-47326252 Glycine max
Glyma.08G361500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 47324253-47326252 Glycine max
Glyma.08G361500 2.0kb downstream 2.0kb downstream 25954 true Chr08: 47298299-47324252 Glycine max
Glyma.08G361500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 47298299-47300298 Glycine max
Glyma.08G361500 5.0kb upstream 5.0kb upstream 28954 true Chr08: 47300299-47329252 Glycine max
Glyma.08G361500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 47324253-47329252 Glycine max
Glyma.08G361500 5.0kb downstream 5.0kb downstream 28954 true Chr08: 47295299-47324252 Glycine max
Glyma.08G361500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 47295299-47300298 Glycine max
Glyma.08G361500 10.0kb upstream 10.0kb upstream 33954 true Chr08: 47300299-47334252 Glycine max
Glyma.08G361500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 47324253-47334252 Glycine max
Glyma.08G361500 10.0kb downstream 10.0kb downstream 33954 true Chr08: 47290299-47324252 Glycine max
Glyma.08G361500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 47290299-47300298 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301991 5265 Fabidae View MSA
124072639 5270 Rosid View MSA
123745171 5271 Pentapetalae View MSA
122788947 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.7594 0.0 50.9564   Low
cufflinks 56.6304 0.0 262.998 High  
cufflinks 22.1547 0.0 68.4356 High  
cufflinks 63.421 0.0 429.933 High  
cufflinks 35.3227 0.0 128.895 High  
cufflinks 8.78587 0.0 27.3608   Low
cufflinks 74.6524 0.0 554.16 High High
cufflinks 38.8475 0.0 193.926 High  
cufflinks 35.8725 0.0 130.474 High  
cufflinks 5.713        
cufflinks 1.142       Low
cufflinks 5.358        
cufflinks 4.758        
cufflinks 5.19        
cufflinks 3.33        
cufflinks 5.607        
cufflinks 2.527        
cufflinks 7.695     High High
cufflinks 10.376     High High
cufflinks 5.329        
cufflinks 1.595       Low
cufflinks 5.682        
cufflinks 5.704        
cufflinks 1.04       Low
cufflinks 5.164        
cufflinks 1.707       Low

0 Strain