Gene : Glyma.08G364000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11353:SF21 - T-COMPLEX PROTEIN 1 SUBUNIT ZETA Genomic Order:  3640
Name:  ? Glyma.08G364000 Secondary Identifier:  ? PAC:30537005
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G364000 0.5kb upstream 0.5kb upstream 6941 true Chr08: 47537290-47544230 Glycine max
Glyma.08G364000 0.5kb upstream 0.5kb upstream 500 false Chr08: 47543731-47544230 Glycine max
Glyma.08G364000 0.5kb downstream 0.5kb downstream 6941 true Chr08: 47536790-47543730 Glycine max
Glyma.08G364000 0.5kb downstream 0.5kb downstream 500 false Chr08: 47536790-47537289 Glycine max
Glyma.08G364000 1.0kb upstream 1.0kb upstream 7441 true Chr08: 47537290-47544730 Glycine max
Glyma.08G364000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 47543731-47544730 Glycine max
Glyma.08G364000 1.0kb downstream 1.0kb downstream 7441 true Chr08: 47536290-47543730 Glycine max
Glyma.08G364000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 47536290-47537289 Glycine max
Glyma.08G364000 2.0kb upstream 2.0kb upstream 8441 true Chr08: 47537290-47545730 Glycine max
Glyma.08G364000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 47543731-47545730 Glycine max
Glyma.08G364000 2.0kb downstream 2.0kb downstream 8441 true Chr08: 47535290-47543730 Glycine max
Glyma.08G364000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 47535290-47537289 Glycine max
Glyma.08G364000 5.0kb upstream 5.0kb upstream 11441 true Chr08: 47537290-47548730 Glycine max
Glyma.08G364000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 47543731-47548730 Glycine max
Glyma.08G364000 5.0kb downstream 5.0kb downstream 11441 true Chr08: 47532290-47543730 Glycine max
Glyma.08G364000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 47532290-47537289 Glycine max
Glyma.08G364000 10.0kb upstream 10.0kb upstream 16441 true Chr08: 47537290-47553730 Glycine max
Glyma.08G364000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 47543731-47553730 Glycine max
Glyma.08G364000 10.0kb downstream 10.0kb downstream 16441 true Chr08: 47527290-47543730 Glycine max
Glyma.08G364000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 47527290-47537289 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301458 5265 Fabidae View MSA
124066156 5270 Rosid View MSA
123744812 5271 Pentapetalae View MSA
122790863 5272 Eudicot View MSA
122045313 5273 Angiosperm View MSA
121344896 5274 Embryophyte View MSA
123424625 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.9745 0.0 53.4982    
cufflinks 32.5486 0.0 89.6078 High  
cufflinks 10.5019 0.0 28.1851   Low
cufflinks 24.8936 0.0 67.3463 High  
cufflinks 48.961 0.0 140.778 High High
cufflinks 29.1165 0.0 79.4979 High  
cufflinks 40.0103 0.0 112.244 High  
cufflinks 30.9276 0.0 84.8203 High  
cufflinks 34.3302 0.0 94.9685 High  
cufflinks 10.016     High  
cufflinks 1.862       Low
cufflinks 7.823     High  
cufflinks 24.78     High High
cufflinks 33.15     High High
cufflinks 3.344        
cufflinks 5.142        
cufflinks 5.774        
cufflinks 8.153     High  
cufflinks 14.369     High High
cufflinks 3.03        
cufflinks 3.957        
cufflinks 3.84        
cufflinks 7.484     High  
cufflinks 2.191       Low
cufflinks 4.467        
cufflinks 5.685        

0 Strain