Gene : Glyma.08G365700 G. max Wm82.a2.v1
Defline:  (1 of 5) 5.3.99.9 - Neoxanthin synthase / NSY Genomic Order:  3657
Name:  ? Glyma.08G365700 Secondary Identifier:  ? PAC:30536272
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6809 Glycine max pathologic  
Gmax PWY-695 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G365700 0.5kb upstream 0.5kb upstream 3737 true Chr08: 47659142-47662878 Glycine max
Glyma.08G365700 0.5kb upstream 0.5kb upstream 500 false Chr08: 47659142-47659641 Glycine max
Glyma.08G365700 0.5kb downstream 0.5kb downstream 3737 true Chr08: 47659642-47663378 Glycine max
Glyma.08G365700 0.5kb downstream 0.5kb downstream 500 false Chr08: 47662879-47663378 Glycine max
Glyma.08G365700 1.0kb upstream 1.0kb upstream 4237 true Chr08: 47658642-47662878 Glycine max
Glyma.08G365700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 47658642-47659641 Glycine max
Glyma.08G365700 1.0kb downstream 1.0kb downstream 4237 true Chr08: 47659642-47663878 Glycine max
Glyma.08G365700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 47662879-47663878 Glycine max
Glyma.08G365700 2.0kb upstream 2.0kb upstream 5237 true Chr08: 47657642-47662878 Glycine max
Glyma.08G365700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 47657642-47659641 Glycine max
Glyma.08G365700 2.0kb downstream 2.0kb downstream 5237 true Chr08: 47659642-47664878 Glycine max
Glyma.08G365700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 47662879-47664878 Glycine max
Glyma.08G365700 5.0kb upstream 5.0kb upstream 8237 true Chr08: 47654642-47662878 Glycine max
Glyma.08G365700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 47654642-47659641 Glycine max
Glyma.08G365700 5.0kb downstream 5.0kb downstream 8237 true Chr08: 47659642-47667878 Glycine max
Glyma.08G365700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 47662879-47667878 Glycine max
Glyma.08G365700 10.0kb upstream 10.0kb upstream 13237 true Chr08: 47649642-47662878 Glycine max
Glyma.08G365700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 47649642-47659641 Glycine max
Glyma.08G365700 10.0kb downstream 10.0kb downstream 13237 true Chr08: 47659642-47672878 Glycine max
Glyma.08G365700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 47662879-47672878 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312106 5265 Fabidae View MSA
124062178 5270 Rosid View MSA
123748588 5271 Pentapetalae View MSA
122790006 5272 Eudicot View MSA
122047205 5273 Angiosperm View MSA
121346000 5274 Embryophyte View MSA
123425892 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.55717 0.0 5.71694   Low
cufflinks 5.06531 0.0 16.8135    
cufflinks 0.969577 0.0 3.63805   Low
cufflinks 3.47386 0.0 12.0213    
cufflinks 3.94635 0.0 13.4968    
cufflinks 3.50913 0.0 12.1308    
cufflinks 9.47063 0.0 28.847   High
cufflinks 2.77269 0.0 9.7776    
cufflinks 3.3176 0.0 11.5334    
cufflinks 1.472        
cufflinks 0.071       Low
cufflinks 0.996        
cufflinks 1.635        
cufflinks 2.4        
cufflinks 0.092       Low
cufflinks 2.011        
cufflinks 0.241        
cufflinks 1.364        
cufflinks 2.213        
cufflinks 1.521        
cufflinks 0.14       Low
cufflinks 1.785        
cufflinks 2.828       High
cufflinks 0.052     Low Low
cufflinks 1.964        
cufflinks 0.193        

0 Strain