Gene : Glyma.08G366200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13952:SF6 - U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 35 KDA PROTEIN Genomic Order:  3662
Name:  ? Glyma.08G366200 Secondary Identifier:  ? PAC:30536183
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G366200 0.5kb upstream 0.5kb upstream 4749 true Chr08: 47711879-47716627 Glycine max
Glyma.08G366200 0.5kb upstream 0.5kb upstream 500 false Chr08: 47716128-47716627 Glycine max
Glyma.08G366200 0.5kb downstream 0.5kb downstream 4749 true Chr08: 47711379-47716127 Glycine max
Glyma.08G366200 0.5kb downstream 0.5kb downstream 500 false Chr08: 47711379-47711878 Glycine max
Glyma.08G366200 1.0kb upstream 1.0kb upstream 5249 true Chr08: 47711879-47717127 Glycine max
Glyma.08G366200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 47716128-47717127 Glycine max
Glyma.08G366200 1.0kb downstream 1.0kb downstream 5249 true Chr08: 47710879-47716127 Glycine max
Glyma.08G366200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 47710879-47711878 Glycine max
Glyma.08G366200 2.0kb upstream 2.0kb upstream 6249 true Chr08: 47711879-47718127 Glycine max
Glyma.08G366200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 47716128-47718127 Glycine max
Glyma.08G366200 2.0kb downstream 2.0kb downstream 6249 true Chr08: 47709879-47716127 Glycine max
Glyma.08G366200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 47709879-47711878 Glycine max
Glyma.08G366200 5.0kb upstream 5.0kb upstream 9249 true Chr08: 47711879-47721127 Glycine max
Glyma.08G366200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 47716128-47721127 Glycine max
Glyma.08G366200 5.0kb downstream 5.0kb downstream 9249 true Chr08: 47706879-47716127 Glycine max
Glyma.08G366200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 47706879-47711878 Glycine max
Glyma.08G366200 10.0kb upstream 10.0kb upstream 14249 true Chr08: 47711879-47726127 Glycine max
Glyma.08G366200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 47716128-47726127 Glycine max
Glyma.08G366200 10.0kb downstream 10.0kb downstream 14249 true Chr08: 47701879-47716127 Glycine max
Glyma.08G366200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 47701879-47711878 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303279 5265 Fabidae View MSA
124062373 5270 Rosid View MSA
123739426 5271 Pentapetalae View MSA
122792874 5272 Eudicot View MSA
122049449 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351469 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.73291 0.0 8.17183    
cufflinks 2.28628 0.0 9.86075    
cufflinks 1.91338 0.0 8.63816    
cufflinks 3.54784 0.0 13.2723   High
cufflinks 1.44758 0.0 7.2164   Low
cufflinks 3.15829 0.0 12.3181   High
cufflinks 1.61178 0.0 7.84692    
cufflinks 2.48405 0.0 10.3912    
cufflinks 1.84861 0.0 8.52936    
cufflinks 0.384        
cufflinks 0.044     Low Low
cufflinks 0.763       High
cufflinks 0.552        
cufflinks 0.56        
cufflinks 0.103        
cufflinks 0.388        
cufflinks 0.077       Low
cufflinks 0.862       High
cufflinks 0.713       High
cufflinks 0.327        
cufflinks 0.078       Low
cufflinks 0.372        
cufflinks 0.486        
cufflinks 0.065       Low
cufflinks 0.309        
cufflinks 0.148        

0 Strain