Sequence Feature Displayer
Ontology Annotation Displayer
2 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Gmax PWY-5466 | Glycine max | pathologic | |
Gmax PWY-6824 | Glycine max | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
Glyma.08G353500 0.5kb upstream | 0.5kb | upstream | 3332 | true | Chr08: 46665229-46668560 | Glycine max |
Glyma.08G353500 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr08: 46665229-46665728 | Glycine max |
Glyma.08G353500 0.5kb downstream | 0.5kb | downstream | 3332 | true | Chr08: 46665729-46669060 | Glycine max |
Glyma.08G353500 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr08: 46668561-46669060 | Glycine max |
Glyma.08G353500 1.0kb upstream | 1.0kb | upstream | 3832 | true | Chr08: 46664729-46668560 | Glycine max |
Glyma.08G353500 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr08: 46664729-46665728 | Glycine max |
Glyma.08G353500 1.0kb downstream | 1.0kb | downstream | 3832 | true | Chr08: 46665729-46669560 | Glycine max |
Glyma.08G353500 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr08: 46668561-46669560 | Glycine max |
Glyma.08G353500 2.0kb upstream | 2.0kb | upstream | 4832 | true | Chr08: 46663729-46668560 | Glycine max |
Glyma.08G353500 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr08: 46663729-46665728 | Glycine max |
Glyma.08G353500 2.0kb downstream | 2.0kb | downstream | 4832 | true | Chr08: 46665729-46670560 | Glycine max |
Glyma.08G353500 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr08: 46668561-46670560 | Glycine max |
Glyma.08G353500 5.0kb upstream | 5.0kb | upstream | 7832 | true | Chr08: 46660729-46668560 | Glycine max |
Glyma.08G353500 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr08: 46660729-46665728 | Glycine max |
Glyma.08G353500 5.0kb downstream | 5.0kb | downstream | 7832 | true | Chr08: 46665729-46673560 | Glycine max |
Glyma.08G353500 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr08: 46668561-46673560 | Glycine max |
Glyma.08G353500 10.0kb upstream | 10.0kb | upstream | 12832 | true | Chr08: 46655729-46668560 | Glycine max |
Glyma.08G353500 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr08: 46655729-46665728 | Glycine max |
Glyma.08G353500 10.0kb downstream | 10.0kb | downstream | 12832 | true | Chr08: 46665729-46678560 | Glycine max |
Glyma.08G353500 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr08: 46668561-46678560 | Glycine max |
7 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122240383 | 5265 | Fabidae | Singleton cluster - no MSA |
124070693 | 5270 | Rosid | View MSA |
123751220 | 5271 | Pentapetalae | View MSA |
122795105 | 5272 | Eudicot | View MSA |
122050716 | 5273 | Angiosperm | View MSA |
121350155 | 5274 | Embryophyte | View MSA |
123428014 | 5275 | Viridiplantae | View MSA |
26 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.0 | 0.0 | 0.0 | Not Expressed | Not Expressed |
cufflinks | 0.0957952 | 0.0 | 0.379883 | Low | High |
cufflinks | 0.0231089 | 0.0 | 0.0988749 | Low | |
cufflinks | 0.00656879 | 0.0 | 0.0315829 | Low | Low |
cufflinks | 0.010362 | 0.0 | 0.0476047 | Low | |
cufflinks | 0.0 | 0.0 | 0.0 | Not Expressed | Not Expressed |
cufflinks | 0.0 | 0.0 | 0.0 | Not Expressed | Not Expressed |
cufflinks | 0.0234844 | 0.0 | 0.100142 | Low | |
cufflinks | 0.0 | 0.0 | 0.0 | Not Expressed | Not Expressed |
cufflinks | 0.011 | Low | Low | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.028 | Low | Low | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.678 | ||||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.137 | ||||
cufflinks | 0.066 | Low | |||
cufflinks | 1.202 | High | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.984 | ||||
cufflinks | 0.732 | ||||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.575 | ||||
cufflinks | 0.0 | Not Expressed | Not Expressed |