Gene : Glyma.08G353900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11545:SF3 - 60S RIBOSOMAL PROTEIN L13A Genomic Order:  3539
Name:  ? Glyma.08G353900 Secondary Identifier:  ? PAC:30540755
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G353900 0.5kb upstream 0.5kb upstream 2190 true Chr08: 46678964-46681153 Glycine max
Glyma.08G353900 0.5kb upstream 0.5kb upstream 500 false Chr08: 46680654-46681153 Glycine max
Glyma.08G353900 0.5kb downstream 0.5kb downstream 2190 true Chr08: 46678464-46680653 Glycine max
Glyma.08G353900 0.5kb downstream 0.5kb downstream 500 false Chr08: 46678464-46678963 Glycine max
Glyma.08G353900 1.0kb upstream 1.0kb upstream 2690 true Chr08: 46678964-46681653 Glycine max
Glyma.08G353900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 46680654-46681653 Glycine max
Glyma.08G353900 1.0kb downstream 1.0kb downstream 2690 true Chr08: 46677964-46680653 Glycine max
Glyma.08G353900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 46677964-46678963 Glycine max
Glyma.08G353900 2.0kb upstream 2.0kb upstream 3690 true Chr08: 46678964-46682653 Glycine max
Glyma.08G353900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 46680654-46682653 Glycine max
Glyma.08G353900 2.0kb downstream 2.0kb downstream 3690 true Chr08: 46676964-46680653 Glycine max
Glyma.08G353900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 46676964-46678963 Glycine max
Glyma.08G353900 5.0kb upstream 5.0kb upstream 6690 true Chr08: 46678964-46685653 Glycine max
Glyma.08G353900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 46680654-46685653 Glycine max
Glyma.08G353900 5.0kb downstream 5.0kb downstream 6690 true Chr08: 46673964-46680653 Glycine max
Glyma.08G353900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 46673964-46678963 Glycine max
Glyma.08G353900 10.0kb upstream 10.0kb upstream 11690 true Chr08: 46678964-46690653 Glycine max
Glyma.08G353900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 46680654-46690653 Glycine max
Glyma.08G353900 10.0kb downstream 10.0kb downstream 11690 true Chr08: 46668964-46680653 Glycine max
Glyma.08G353900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 46668964-46678963 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310047 5265 Fabidae View MSA
124069577 5270 Rosid View MSA
123745483 5271 Pentapetalae View MSA
122796740 5272 Eudicot View MSA
122042126 5273 Angiosperm View MSA
121343862 5274 Embryophyte View MSA
123428218 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.1262 0.0 118.333 High  
cufflinks 66.4883 0.0 182.211 High  
cufflinks 23.8547 0.0 63.9472 High Low
cufflinks 41.0462 0.0 109.883 High  
cufflinks 104.206 0.0 301.45 High High
cufflinks 102.146 0.0 293.255 High  
cufflinks 91.2647 0.0 259.79 High  
cufflinks 68.7659 0.0 189.427 High  
cufflinks 76.9251 0.0 213.823 High  
cufflinks 35.469     High  
cufflinks 8.85     High Low
cufflinks 27.076     High  
cufflinks 94.699     High High
cufflinks 145.299     High High
cufflinks 7.043     High Low
cufflinks 22.344     High  
cufflinks 27.072     High  
cufflinks 25.667     High  
cufflinks 41.604     High  
cufflinks 15.484     High  
cufflinks 13.606     High  
cufflinks 17.169     High  
cufflinks 35.597     High  
cufflinks 11.436     High  
cufflinks 18.924     High  
cufflinks 19.563     High  

0 Strain