Gene : Glyma.08G354400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15898:SF1 - GLUCOSE-INDUCED DEGRADATION PROTEIN 4 HOMOLOG Genomic Order:  3544
Name:  ? Glyma.08G354400 Secondary Identifier:  ? PAC:30539168
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G354400 0.5kb upstream 0.5kb upstream 6018 true Chr08: 46719600-46725617 Glycine max
Glyma.08G354400 0.5kb upstream 0.5kb upstream 500 false Chr08: 46725118-46725617 Glycine max
Glyma.08G354400 0.5kb downstream 0.5kb downstream 6018 true Chr08: 46719100-46725117 Glycine max
Glyma.08G354400 0.5kb downstream 0.5kb downstream 500 false Chr08: 46719100-46719599 Glycine max
Glyma.08G354400 1.0kb upstream 1.0kb upstream 6518 true Chr08: 46719600-46726117 Glycine max
Glyma.08G354400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 46725118-46726117 Glycine max
Glyma.08G354400 1.0kb downstream 1.0kb downstream 6518 true Chr08: 46718600-46725117 Glycine max
Glyma.08G354400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 46718600-46719599 Glycine max
Glyma.08G354400 2.0kb upstream 2.0kb upstream 7518 true Chr08: 46719600-46727117 Glycine max
Glyma.08G354400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 46725118-46727117 Glycine max
Glyma.08G354400 2.0kb downstream 2.0kb downstream 7518 true Chr08: 46717600-46725117 Glycine max
Glyma.08G354400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 46717600-46719599 Glycine max
Glyma.08G354400 5.0kb upstream 5.0kb upstream 10518 true Chr08: 46719600-46730117 Glycine max
Glyma.08G354400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 46725118-46730117 Glycine max
Glyma.08G354400 5.0kb downstream 5.0kb downstream 10518 true Chr08: 46714600-46725117 Glycine max
Glyma.08G354400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 46714600-46719599 Glycine max
Glyma.08G354400 10.0kb upstream 10.0kb upstream 15518 true Chr08: 46719600-46735117 Glycine max
Glyma.08G354400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 46725118-46735117 Glycine max
Glyma.08G354400 10.0kb downstream 10.0kb downstream 15518 true Chr08: 46709600-46725117 Glycine max
Glyma.08G354400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 46709600-46719599 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299915 5265 Fabidae View MSA
124060763 5270 Rosid View MSA
123743131 5271 Pentapetalae View MSA
122792219 5272 Eudicot View MSA
122046771 5273 Angiosperm View MSA
121351616 5274 Embryophyte View MSA
123427773 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.23777 0.0 25.1649   Low
cufflinks 13.5054 0.0 36.1478    
cufflinks 21.1535 0.0 56.5845 High  
cufflinks 14.6801 0.0 39.2194    
cufflinks 13.5491 0.0 36.2836    
cufflinks 24.7221 0.0 66.3753 High High
cufflinks 21.7775 0.0 58.2286 High  
cufflinks 15.6534 0.0 41.7806    
cufflinks 17.9675 0.0 47.9379    
cufflinks 6.141        
cufflinks 6.317     High  
cufflinks 5.214        
cufflinks 5.436        
cufflinks 4.632        
cufflinks 8.157     High  
cufflinks 8.721     High  
cufflinks 2.126       Low
cufflinks 5.726        
cufflinks 4.84        
cufflinks 12.098     High High
cufflinks 5.823     High  
cufflinks 8.833     High  
cufflinks 4.584        
cufflinks 4.715        
cufflinks 10.468     High High
cufflinks 4.451        

0 Strain