Gene : Glyma.08G354500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22847//PTHR22847:SF473 - WD40 REPEAT PROTEIN Genomic Order:  3545
Name:  ? Glyma.08G354500 Secondary Identifier:  ? PAC:30537650
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G354500 0.5kb upstream 0.5kb upstream 9003 true Chr08: 46732447-46741449 Glycine max
Glyma.08G354500 0.5kb upstream 0.5kb upstream 500 false Chr08: 46740950-46741449 Glycine max
Glyma.08G354500 0.5kb downstream 0.5kb downstream 9003 true Chr08: 46731947-46740949 Glycine max
Glyma.08G354500 0.5kb downstream 0.5kb downstream 500 false Chr08: 46731947-46732446 Glycine max
Glyma.08G354500 1.0kb upstream 1.0kb upstream 9503 true Chr08: 46732447-46741949 Glycine max
Glyma.08G354500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 46740950-46741949 Glycine max
Glyma.08G354500 1.0kb downstream 1.0kb downstream 9503 true Chr08: 46731447-46740949 Glycine max
Glyma.08G354500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 46731447-46732446 Glycine max
Glyma.08G354500 2.0kb upstream 2.0kb upstream 10503 true Chr08: 46732447-46742949 Glycine max
Glyma.08G354500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 46740950-46742949 Glycine max
Glyma.08G354500 2.0kb downstream 2.0kb downstream 10503 true Chr08: 46730447-46740949 Glycine max
Glyma.08G354500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 46730447-46732446 Glycine max
Glyma.08G354500 5.0kb upstream 5.0kb upstream 13503 true Chr08: 46732447-46745949 Glycine max
Glyma.08G354500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 46740950-46745949 Glycine max
Glyma.08G354500 5.0kb downstream 5.0kb downstream 13503 true Chr08: 46727447-46740949 Glycine max
Glyma.08G354500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 46727447-46732446 Glycine max
Glyma.08G354500 10.0kb upstream 10.0kb upstream 18503 true Chr08: 46732447-46750949 Glycine max
Glyma.08G354500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 46740950-46750949 Glycine max
Glyma.08G354500 10.0kb downstream 10.0kb downstream 18503 true Chr08: 46722447-46740949 Glycine max
Glyma.08G354500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 46722447-46732446 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306569 5265 Fabidae View MSA
124070895 5270 Rosid View MSA
123751820 5271 Pentapetalae View MSA
122789823 5272 Eudicot View MSA
122046787 5273 Angiosperm View MSA
123429146 5275 Viridiplantae View MSA
121350041 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.35902 0.0 34.1916    
cufflinks 12.2337 0.0 46.9078   High
cufflinks 8.00205 0.0 31.1071    
cufflinks 10.6335 0.0 44.2732    
cufflinks 5.58018 0.0 19.7632   Low
cufflinks 5.52606 0.0 21.7836   Low
cufflinks 10.1393 0.0 43.7226    
cufflinks 10.0857 0.0 43.5591    
cufflinks 9.17928 0.0 42.0317    
cufflinks 0.948        
cufflinks 0.23       Low
cufflinks 1.11        
cufflinks 0.482        
cufflinks 0.459        
cufflinks 0.675        
cufflinks 0.696        
cufflinks 0.609        
cufflinks 1.63       High
cufflinks 1.345       High
cufflinks 0.881        
cufflinks 0.277       Low
cufflinks 0.949        
cufflinks 0.863        
cufflinks 0.4        
cufflinks 0.802        
cufflinks 0.426        

0 Strain