Gene : Glyma.08G356000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13516:SF3 - ALBA DNA/RNA-BINDING PROTEIN Genomic Order:  3560
Name:  ? Glyma.08G356000 Secondary Identifier:  ? PAC:30538059
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G356000 0.5kb upstream 0.5kb upstream 4342 true Chr08: 46862749-46867090 Glycine max
Glyma.08G356000 0.5kb upstream 0.5kb upstream 500 false Chr08: 46866591-46867090 Glycine max
Glyma.08G356000 0.5kb downstream 0.5kb downstream 4342 true Chr08: 46862249-46866590 Glycine max
Glyma.08G356000 0.5kb downstream 0.5kb downstream 500 false Chr08: 46862249-46862748 Glycine max
Glyma.08G356000 1.0kb upstream 1.0kb upstream 4842 true Chr08: 46862749-46867590 Glycine max
Glyma.08G356000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 46866591-46867590 Glycine max
Glyma.08G356000 1.0kb downstream 1.0kb downstream 4842 true Chr08: 46861749-46866590 Glycine max
Glyma.08G356000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 46861749-46862748 Glycine max
Glyma.08G356000 2.0kb upstream 2.0kb upstream 5842 true Chr08: 46862749-46868590 Glycine max
Glyma.08G356000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 46866591-46868590 Glycine max
Glyma.08G356000 2.0kb downstream 2.0kb downstream 5842 true Chr08: 46860749-46866590 Glycine max
Glyma.08G356000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 46860749-46862748 Glycine max
Glyma.08G356000 5.0kb upstream 5.0kb upstream 8842 true Chr08: 46862749-46871590 Glycine max
Glyma.08G356000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 46866591-46871590 Glycine max
Glyma.08G356000 5.0kb downstream 5.0kb downstream 8842 true Chr08: 46857749-46866590 Glycine max
Glyma.08G356000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 46857749-46862748 Glycine max
Glyma.08G356000 10.0kb upstream 10.0kb upstream 13842 true Chr08: 46862749-46876590 Glycine max
Glyma.08G356000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 46866591-46876590 Glycine max
Glyma.08G356000 10.0kb downstream 10.0kb downstream 13842 true Chr08: 46852749-46866590 Glycine max
Glyma.08G356000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 46852749-46862748 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298759 5265 Fabidae View MSA
124042672 5270 Rosid View MSA
123752020 5271 Pentapetalae View MSA
122793375 5272 Eudicot View MSA
122050157 5273 Angiosperm View MSA
121346602 5274 Embryophyte View MSA
123428727 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.13322 0.0 27.9941   Low
cufflinks 18.5616 0.0 52.0709    
cufflinks 7.67731 0.0 24.1016   Low
cufflinks 15.6081 0.0 44.4691    
cufflinks 21.1017 0.0 58.2903 High  
cufflinks 11.2455 0.0 33.5098    
cufflinks 27.5474 0.0 74.7461 High High
cufflinks 15.5464 0.0 44.3772    
cufflinks 15.6685 0.0 44.7343    
cufflinks 5.043        
cufflinks 4.874        
cufflinks 4.017       Low
cufflinks 7.907     High High
cufflinks 10.818     High High
cufflinks 7.615     High High
cufflinks 6.048        
cufflinks 3.429       Low
cufflinks 4.811        
cufflinks 7.517     High  
cufflinks 6.164        
cufflinks 5.094        
cufflinks 6.078        
cufflinks 6.084        
cufflinks 4.555        
cufflinks 5.851        
cufflinks 4.401        

0 Strain