Gene : Glyma.08G359100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11709:SF66 - LACCASE-17 Genomic Order:  3591
Name:  ? Glyma.08G359100 Secondary Identifier:  ? PAC:30536136
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5466 Glycine max pathologic  
Gmax PWY-6824 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G359100 0.5kb upstream 0.5kb upstream 3840 true Chr08: 47104888-47108727 Glycine max
Glyma.08G359100 0.5kb upstream 0.5kb upstream 500 false Chr08: 47104888-47105387 Glycine max
Glyma.08G359100 0.5kb downstream 0.5kb downstream 3840 true Chr08: 47105388-47109227 Glycine max
Glyma.08G359100 0.5kb downstream 0.5kb downstream 500 false Chr08: 47108728-47109227 Glycine max
Glyma.08G359100 1.0kb upstream 1.0kb upstream 4340 true Chr08: 47104388-47108727 Glycine max
Glyma.08G359100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 47104388-47105387 Glycine max
Glyma.08G359100 1.0kb downstream 1.0kb downstream 4340 true Chr08: 47105388-47109727 Glycine max
Glyma.08G359100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 47108728-47109727 Glycine max
Glyma.08G359100 2.0kb upstream 2.0kb upstream 5340 true Chr08: 47103388-47108727 Glycine max
Glyma.08G359100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 47103388-47105387 Glycine max
Glyma.08G359100 2.0kb downstream 2.0kb downstream 5340 true Chr08: 47105388-47110727 Glycine max
Glyma.08G359100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 47108728-47110727 Glycine max
Glyma.08G359100 5.0kb upstream 5.0kb upstream 8340 true Chr08: 47100388-47108727 Glycine max
Glyma.08G359100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 47100388-47105387 Glycine max
Glyma.08G359100 5.0kb downstream 5.0kb downstream 8340 true Chr08: 47105388-47113727 Glycine max
Glyma.08G359100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 47108728-47113727 Glycine max
Glyma.08G359100 10.0kb upstream 10.0kb upstream 13340 true Chr08: 47095388-47108727 Glycine max
Glyma.08G359100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 47095388-47105387 Glycine max
Glyma.08G359100 10.0kb downstream 10.0kb downstream 13340 true Chr08: 47105388-47118727 Glycine max
Glyma.08G359100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 47108728-47118727 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313591 5265 Fabidae View MSA
124062715 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.76054 0.0 5.77846    
cufflinks 4.50745 0.0 12.9808    
cufflinks 1.09615 0.0 3.79058    
cufflinks 3.36955 0.0 10.06    
cufflinks 3.45205 0.0 10.3103    
cufflinks 0.906319 0.0 3.19196    
cufflinks 0.0092141 0.0 0.0422025 Low Low
cufflinks 15.2291 0.0 40.6294   High
cufflinks 6.41611 0.0 17.7833    
cufflinks 11.548     High High
cufflinks 0.479       Low
cufflinks 1.472        
cufflinks 5.187        
cufflinks 0.46       Low
cufflinks 0.503       Low
cufflinks 7.824     High  
cufflinks 4.172        
cufflinks 5.547        
cufflinks 2.117        
cufflinks 8.484     High  
cufflinks 0.64       Low
cufflinks 9.77     High High
cufflinks 6.543        
cufflinks 0.326       Low
cufflinks 8.23     High  
cufflinks 2.228        

0 Strain