Gene : Glyma.08G359300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11709//PTHR11709:SF70 - MULTI-COPPER OXIDASE Genomic Order:  3593
Name:  ? Glyma.08G359300 Secondary Identifier:  ? PAC:30537026
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5466 Glycine max pathologic  
Gmax PWY-6824 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G359300 0.5kb upstream 0.5kb upstream 4034 true Chr08: 47117261-47121294 Glycine max
Glyma.08G359300 0.5kb upstream 0.5kb upstream 500 false Chr08: 47120795-47121294 Glycine max
Glyma.08G359300 0.5kb downstream 0.5kb downstream 4034 true Chr08: 47116761-47120794 Glycine max
Glyma.08G359300 0.5kb downstream 0.5kb downstream 500 false Chr08: 47116761-47117260 Glycine max
Glyma.08G359300 1.0kb upstream 1.0kb upstream 4534 true Chr08: 47117261-47121794 Glycine max
Glyma.08G359300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 47120795-47121794 Glycine max
Glyma.08G359300 1.0kb downstream 1.0kb downstream 4534 true Chr08: 47116261-47120794 Glycine max
Glyma.08G359300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 47116261-47117260 Glycine max
Glyma.08G359300 2.0kb upstream 2.0kb upstream 5534 true Chr08: 47117261-47122794 Glycine max
Glyma.08G359300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 47120795-47122794 Glycine max
Glyma.08G359300 2.0kb downstream 2.0kb downstream 5534 true Chr08: 47115261-47120794 Glycine max
Glyma.08G359300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 47115261-47117260 Glycine max
Glyma.08G359300 5.0kb upstream 5.0kb upstream 8534 true Chr08: 47117261-47125794 Glycine max
Glyma.08G359300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 47120795-47125794 Glycine max
Glyma.08G359300 5.0kb downstream 5.0kb downstream 8534 true Chr08: 47112261-47120794 Glycine max
Glyma.08G359300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 47112261-47117260 Glycine max
Glyma.08G359300 10.0kb upstream 10.0kb upstream 13534 true Chr08: 47117261-47130794 Glycine max
Glyma.08G359300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 47120795-47130794 Glycine max
Glyma.08G359300 10.0kb downstream 10.0kb downstream 13534 true Chr08: 47107261-47120794 Glycine max
Glyma.08G359300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 47107261-47117260 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313591 5265 Fabidae View MSA
124062715 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.387591 0.0 1.42299    
cufflinks 0.511231 0.0 1.84641    
cufflinks 0.256446 0.0 0.961304   Low
cufflinks 0.782583 0.0 2.73438    
cufflinks 0.698918 0.0 2.46641    
cufflinks 0.529685 0.0 1.90732    
cufflinks 0.561176 0.0 2.01037    
cufflinks 3.96953 0.0 11.269   High
cufflinks 0.659409 0.0 2.33739    
cufflinks 11.367     High High
cufflinks 0.093       Low
cufflinks 0.108     Low  
cufflinks 1.234        
cufflinks 0.105        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.755        
cufflinks 0.539        
cufflinks 0.176        
cufflinks 0.111        
cufflinks 0.818        
cufflinks 0.102        
cufflinks 1.071        
cufflinks 0.533        
cufflinks 0.076       Low
cufflinks 0.73        
cufflinks 0.312        

0 Strain