Gene : Glyma.08G346900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31808:SF2 - F21O3.2 PROTEIN-RELATED Genomic Order:  3469
Name:  ? Glyma.08G346900 Secondary Identifier:  ? PAC:30535817
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G346900 0.5kb upstream 0.5kb upstream 5260 true Chr08: 46161398-46166657 Glycine max
Glyma.08G346900 0.5kb upstream 0.5kb upstream 500 false Chr08: 46161398-46161897 Glycine max
Glyma.08G346900 0.5kb downstream 0.5kb downstream 5260 true Chr08: 46161898-46167157 Glycine max
Glyma.08G346900 0.5kb downstream 0.5kb downstream 500 false Chr08: 46166658-46167157 Glycine max
Glyma.08G346900 1.0kb upstream 1.0kb upstream 5760 true Chr08: 46160898-46166657 Glycine max
Glyma.08G346900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 46160898-46161897 Glycine max
Glyma.08G346900 1.0kb downstream 1.0kb downstream 5760 true Chr08: 46161898-46167657 Glycine max
Glyma.08G346900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 46166658-46167657 Glycine max
Glyma.08G346900 2.0kb upstream 2.0kb upstream 6760 true Chr08: 46159898-46166657 Glycine max
Glyma.08G346900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 46159898-46161897 Glycine max
Glyma.08G346900 2.0kb downstream 2.0kb downstream 6760 true Chr08: 46161898-46168657 Glycine max
Glyma.08G346900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 46166658-46168657 Glycine max
Glyma.08G346900 5.0kb upstream 5.0kb upstream 9760 true Chr08: 46156898-46166657 Glycine max
Glyma.08G346900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 46156898-46161897 Glycine max
Glyma.08G346900 5.0kb downstream 5.0kb downstream 9760 true Chr08: 46161898-46171657 Glycine max
Glyma.08G346900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 46166658-46171657 Glycine max
Glyma.08G346900 10.0kb upstream 10.0kb upstream 14760 true Chr08: 46151898-46166657 Glycine max
Glyma.08G346900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 46151898-46161897 Glycine max
Glyma.08G346900 10.0kb downstream 10.0kb downstream 14760 true Chr08: 46161898-46176657 Glycine max
Glyma.08G346900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 46166658-46176657 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255066 5265 Fabidae View MSA
123996949 5270 Rosid View MSA
123742613 5271 Pentapetalae View MSA
122790300 5272 Eudicot View MSA
122047287 5273 Angiosperm View MSA
121310722 5274 Embryophyte View MSA
123428654 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.41624 0.0 10.421    
cufflinks 0.994308 0.0 3.5155    
cufflinks 37.6156 0.0 103.621 High High
cufflinks 1.99751 0.0 6.55982    
cufflinks 1.53329 0.0 5.21158    
cufflinks 2.20923 0.0 7.1622    
cufflinks 1.53806 0.0 5.22968    
cufflinks 1.17732 0.0 4.10269    
cufflinks 2.61567 0.0 8.27573    
cufflinks 0.042     Low Low
cufflinks 22.581     High High
cufflinks 5.087        
cufflinks 0.187       Low
cufflinks 0.441        
cufflinks 8.302     High  
cufflinks 0.931        
cufflinks 0.235        
cufflinks 0.924        
cufflinks 0.589        
cufflinks 1.661        
cufflinks 20.736     High High
cufflinks 0.771        
cufflinks 0.251        
cufflinks 17.124     High High
cufflinks 1.359        
cufflinks 6.83     High  

0 Strain