Gene : Glyma.08G347800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10693:SF23 - NUCLEAR TRANSPORT FACTOR 2 AND RNA RECOGNITION MOTIF DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3478
Name:  ? Glyma.08G347800 Secondary Identifier:  ? PAC:30539020
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G347800 0.5kb upstream 0.5kb upstream 5360 true Chr08: 46216575-46221934 Glycine max
Glyma.08G347800 0.5kb upstream 0.5kb upstream 500 false Chr08: 46216575-46217074 Glycine max
Glyma.08G347800 0.5kb downstream 0.5kb downstream 5360 true Chr08: 46217075-46222434 Glycine max
Glyma.08G347800 0.5kb downstream 0.5kb downstream 500 false Chr08: 46221935-46222434 Glycine max
Glyma.08G347800 1.0kb upstream 1.0kb upstream 5860 true Chr08: 46216075-46221934 Glycine max
Glyma.08G347800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 46216075-46217074 Glycine max
Glyma.08G347800 1.0kb downstream 1.0kb downstream 5860 true Chr08: 46217075-46222934 Glycine max
Glyma.08G347800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 46221935-46222934 Glycine max
Glyma.08G347800 2.0kb upstream 2.0kb upstream 6860 true Chr08: 46215075-46221934 Glycine max
Glyma.08G347800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 46215075-46217074 Glycine max
Glyma.08G347800 2.0kb downstream 2.0kb downstream 6860 true Chr08: 46217075-46223934 Glycine max
Glyma.08G347800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 46221935-46223934 Glycine max
Glyma.08G347800 5.0kb upstream 5.0kb upstream 9860 true Chr08: 46212075-46221934 Glycine max
Glyma.08G347800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 46212075-46217074 Glycine max
Glyma.08G347800 5.0kb downstream 5.0kb downstream 9860 true Chr08: 46217075-46226934 Glycine max
Glyma.08G347800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 46221935-46226934 Glycine max
Glyma.08G347800 10.0kb upstream 10.0kb upstream 14860 true Chr08: 46207075-46221934 Glycine max
Glyma.08G347800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 46207075-46217074 Glycine max
Glyma.08G347800 10.0kb downstream 10.0kb downstream 14860 true Chr08: 46217075-46231934 Glycine max
Glyma.08G347800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 46221935-46231934 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300154 5265 Fabidae View MSA
124061290 5270 Rosid View MSA
123751309 5271 Pentapetalae View MSA
122795066 5272 Eudicot View MSA
122049730 5273 Angiosperm View MSA
121351180 5274 Embryophyte View MSA
123426443 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3241 0.0 30.3148    
cufflinks 18.2876 0.0 48.9014    
cufflinks 8.2149 0.0 22.2727   Low
cufflinks 19.8376 0.0 53.1827    
cufflinks 21.1352 0.0 56.789 High  
cufflinks 12.1266 0.0 32.4075    
cufflinks 21.9813 0.0 59.1397 High High
cufflinks 16.7097 0.0 44.6215    
cufflinks 15.7771 0.0 42.104    
cufflinks 7.182        
cufflinks 4.698       Low
cufflinks 6.186        
cufflinks 11.254     High High
cufflinks 14.28     High High
cufflinks 6.032     High  
cufflinks 7.044        
cufflinks 8.151     High  
cufflinks 7.236        
cufflinks 11.471     High High
cufflinks 5.079        
cufflinks 5.729     High  
cufflinks 5.474        
cufflinks 7.116        
cufflinks 4.957       Low
cufflinks 5.678        
cufflinks 5.255        

0 Strain