Gene : Glyma.08G348700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10159:SF293 - DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 Genomic Order:  3487
Name:  ? Glyma.08G348700 Secondary Identifier:  ? PAC:30537959
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G348700 0.5kb upstream 0.5kb upstream 3513 true Chr08: 46308560-46312072 Glycine max
Glyma.08G348700 0.5kb upstream 0.5kb upstream 500 false Chr08: 46308560-46309059 Glycine max
Glyma.08G348700 0.5kb downstream 0.5kb downstream 3513 true Chr08: 46309060-46312572 Glycine max
Glyma.08G348700 0.5kb downstream 0.5kb downstream 500 false Chr08: 46312073-46312572 Glycine max
Glyma.08G348700 1.0kb upstream 1.0kb upstream 4013 true Chr08: 46308060-46312072 Glycine max
Glyma.08G348700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 46308060-46309059 Glycine max
Glyma.08G348700 1.0kb downstream 1.0kb downstream 4013 true Chr08: 46309060-46313072 Glycine max
Glyma.08G348700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 46312073-46313072 Glycine max
Glyma.08G348700 2.0kb upstream 2.0kb upstream 5013 true Chr08: 46307060-46312072 Glycine max
Glyma.08G348700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 46307060-46309059 Glycine max
Glyma.08G348700 2.0kb downstream 2.0kb downstream 5013 true Chr08: 46309060-46314072 Glycine max
Glyma.08G348700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 46312073-46314072 Glycine max
Glyma.08G348700 5.0kb upstream 5.0kb upstream 8013 true Chr08: 46304060-46312072 Glycine max
Glyma.08G348700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 46304060-46309059 Glycine max
Glyma.08G348700 5.0kb downstream 5.0kb downstream 8013 true Chr08: 46309060-46317072 Glycine max
Glyma.08G348700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 46312073-46317072 Glycine max
Glyma.08G348700 10.0kb upstream 10.0kb upstream 13013 true Chr08: 46299060-46312072 Glycine max
Glyma.08G348700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 46299060-46309059 Glycine max
Glyma.08G348700 10.0kb downstream 10.0kb downstream 13013 true Chr08: 46309060-46322072 Glycine max
Glyma.08G348700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 46312073-46322072 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028012 5273 Angiosperm View MSA
122297660 5265 Fabidae View MSA
124050385 5270 Rosid View MSA
123750058 5271 Pentapetalae View MSA
122788963 5272 Eudicot View MSA
121297567 5274 Embryophyte View MSA
123335609 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.1666 0.0 4.28301    
cufflinks 1.11728 0.0 4.10859    
cufflinks 0.842385 0.0 3.13746   Low
cufflinks 1.02796 0.0 3.79571    
cufflinks 1.06124 0.0 3.91757    
cufflinks 0.891452 0.0 3.3177   Low
cufflinks 1.33028 0.0 4.8518   High
cufflinks 1.01952 0.0 3.76309    
cufflinks 1.00002 0.0 3.69917    
cufflinks 0.142        
cufflinks 0.111        
cufflinks 0.541       High
cufflinks 0.737       High
cufflinks 0.871       High
cufflinks 0.114        
cufflinks 0.117        
cufflinks 0.197        
cufflinks 0.295        
cufflinks 0.419       High
cufflinks 0.176        
cufflinks 0.149        
cufflinks 0.109        
cufflinks 0.106        
cufflinks 0.191        
cufflinks 0.074     Low Low
cufflinks 0.092        

0 Strain