Gene : Glyma.08G349500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33159:SF6 - RPM1-INTERACTING PROTEIN 4 Genomic Order:  3495
Name:  ? Glyma.08G349500 Secondary Identifier:  ? PAC:30541298
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G349500 0.5kb upstream 0.5kb upstream 5847 true Chr08: 46369527-46375373 Glycine max
Glyma.08G349500 0.5kb upstream 0.5kb upstream 500 false Chr08: 46374874-46375373 Glycine max
Glyma.08G349500 0.5kb downstream 0.5kb downstream 5847 true Chr08: 46369027-46374873 Glycine max
Glyma.08G349500 0.5kb downstream 0.5kb downstream 500 false Chr08: 46369027-46369526 Glycine max
Glyma.08G349500 1.0kb upstream 1.0kb upstream 6347 true Chr08: 46369527-46375873 Glycine max
Glyma.08G349500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 46374874-46375873 Glycine max
Glyma.08G349500 1.0kb downstream 1.0kb downstream 6347 true Chr08: 46368527-46374873 Glycine max
Glyma.08G349500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 46368527-46369526 Glycine max
Glyma.08G349500 2.0kb upstream 2.0kb upstream 7347 true Chr08: 46369527-46376873 Glycine max
Glyma.08G349500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 46374874-46376873 Glycine max
Glyma.08G349500 2.0kb downstream 2.0kb downstream 7347 true Chr08: 46367527-46374873 Glycine max
Glyma.08G349500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 46367527-46369526 Glycine max
Glyma.08G349500 5.0kb upstream 5.0kb upstream 10347 true Chr08: 46369527-46379873 Glycine max
Glyma.08G349500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 46374874-46379873 Glycine max
Glyma.08G349500 5.0kb downstream 5.0kb downstream 10347 true Chr08: 46364527-46374873 Glycine max
Glyma.08G349500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 46364527-46369526 Glycine max
Glyma.08G349500 10.0kb upstream 10.0kb upstream 15347 true Chr08: 46369527-46384873 Glycine max
Glyma.08G349500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 46374874-46384873 Glycine max
Glyma.08G349500 10.0kb downstream 10.0kb downstream 15347 true Chr08: 46359527-46374873 Glycine max
Glyma.08G349500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 46359527-46369526 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311528 5265 Fabidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.47085 0.0 20.2801    
cufflinks 4.16659 0.0 19.442    
cufflinks 3.41622 0.0 16.9395   Low
cufflinks 5.7268 0.0 24.0244    
cufflinks 3.91422 0.0 18.5813    
cufflinks 10.4326 0.0 37.518   High
cufflinks 5.64284 0.0 24.0268    
cufflinks 5.56353 0.0 20.2924    
cufflinks 7.82171 0.0 30.0064   High
cufflinks 0.643        
cufflinks 0.579        
cufflinks 0.563        
cufflinks 0.575        
cufflinks 0.462        
cufflinks 0.289       Low
cufflinks 0.621        
cufflinks 0.476        
cufflinks 0.705        
cufflinks 0.65        
cufflinks 0.729        
cufflinks 0.484        
cufflinks 0.734        
cufflinks 0.604        
cufflinks 0.907       High
cufflinks 0.645        
cufflinks 0.474        

0 Strain