Gene : Glyma.08G349700 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG2459 - GPI transamidase complex, GPI17/PIG-S component, involved in glycosylphosphatidylinositol anchor biosynthesis Genomic Order:  3497
Name:  ? Glyma.08G349700 Secondary Identifier:  ? PAC:30541270
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G349700 0.5kb upstream 0.5kb upstream 6106 true Chr08: 46383224-46389329 Glycine max
Glyma.08G349700 0.5kb upstream 0.5kb upstream 500 false Chr08: 46383224-46383723 Glycine max
Glyma.08G349700 0.5kb downstream 0.5kb downstream 6106 true Chr08: 46383724-46389829 Glycine max
Glyma.08G349700 0.5kb downstream 0.5kb downstream 500 false Chr08: 46389330-46389829 Glycine max
Glyma.08G349700 1.0kb upstream 1.0kb upstream 6606 true Chr08: 46382724-46389329 Glycine max
Glyma.08G349700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 46382724-46383723 Glycine max
Glyma.08G349700 1.0kb downstream 1.0kb downstream 6606 true Chr08: 46383724-46390329 Glycine max
Glyma.08G349700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 46389330-46390329 Glycine max
Glyma.08G349700 2.0kb upstream 2.0kb upstream 7606 true Chr08: 46381724-46389329 Glycine max
Glyma.08G349700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 46381724-46383723 Glycine max
Glyma.08G349700 2.0kb downstream 2.0kb downstream 7606 true Chr08: 46383724-46391329 Glycine max
Glyma.08G349700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 46389330-46391329 Glycine max
Glyma.08G349700 5.0kb upstream 5.0kb upstream 10606 true Chr08: 46378724-46389329 Glycine max
Glyma.08G349700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 46378724-46383723 Glycine max
Glyma.08G349700 5.0kb downstream 5.0kb downstream 10606 true Chr08: 46383724-46394329 Glycine max
Glyma.08G349700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 46389330-46394329 Glycine max
Glyma.08G349700 10.0kb upstream 10.0kb upstream 15606 true Chr08: 46373724-46389329 Glycine max
Glyma.08G349700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 46373724-46383723 Glycine max
Glyma.08G349700 10.0kb downstream 10.0kb downstream 15606 true Chr08: 46383724-46399329 Glycine max
Glyma.08G349700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 46389330-46399329 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301678 5265 Fabidae View MSA
124066381 5270 Rosid View MSA
123740314 5271 Pentapetalae View MSA
122787457 5272 Eudicot View MSA
122046562 5273 Angiosperm View MSA
121348153 5274 Embryophyte View MSA
123426160 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.7265 0.0 23.5171    
cufflinks 11.8882 0.0 31.7502    
cufflinks 8.90886 0.0 23.9772    
cufflinks 11.9276 0.0 31.851    
cufflinks 12.0774 0.0 32.2444    
cufflinks 6.77993 0.0 18.5286   Low
cufflinks 16.8266 0.0 44.9901   High
cufflinks 10.7607 0.0 28.7965    
cufflinks 9.5108 0.0 25.539    
cufflinks 7.192        
cufflinks 3.647       Low
cufflinks 9.202     High  
cufflinks 7.035        
cufflinks 9.965     High  
cufflinks 6.62     High  
cufflinks 10.387     High  
cufflinks 3.201       Low
cufflinks 13.837     High High
cufflinks 10.114     High  
cufflinks 11.042     High  
cufflinks 3.832       Low
cufflinks 10.779     High  
cufflinks 8.734     High  
cufflinks 3.359       Low
cufflinks 11.074     High  
cufflinks 4.02       Low

0 Strain