Gene : Glyma.08G351100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33385:SF4 - PROTEIN XRI1 Genomic Order:  3511
Name:  ? Glyma.08G351100 Secondary Identifier:  ? PAC:30541126
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G351100 0.5kb upstream 0.5kb upstream 4447 true Chr08: 46472912-46477358 Glycine max
Glyma.08G351100 0.5kb upstream 0.5kb upstream 500 false Chr08: 46476859-46477358 Glycine max
Glyma.08G351100 0.5kb downstream 0.5kb downstream 4447 true Chr08: 46472412-46476858 Glycine max
Glyma.08G351100 0.5kb downstream 0.5kb downstream 500 false Chr08: 46472412-46472911 Glycine max
Glyma.08G351100 1.0kb upstream 1.0kb upstream 4947 true Chr08: 46472912-46477858 Glycine max
Glyma.08G351100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 46476859-46477858 Glycine max
Glyma.08G351100 1.0kb downstream 1.0kb downstream 4947 true Chr08: 46471912-46476858 Glycine max
Glyma.08G351100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 46471912-46472911 Glycine max
Glyma.08G351100 2.0kb upstream 2.0kb upstream 5947 true Chr08: 46472912-46478858 Glycine max
Glyma.08G351100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 46476859-46478858 Glycine max
Glyma.08G351100 2.0kb downstream 2.0kb downstream 5947 true Chr08: 46470912-46476858 Glycine max
Glyma.08G351100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 46470912-46472911 Glycine max
Glyma.08G351100 5.0kb upstream 5.0kb upstream 8947 true Chr08: 46472912-46481858 Glycine max
Glyma.08G351100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 46476859-46481858 Glycine max
Glyma.08G351100 5.0kb downstream 5.0kb downstream 8947 true Chr08: 46467912-46476858 Glycine max
Glyma.08G351100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 46467912-46472911 Glycine max
Glyma.08G351100 10.0kb upstream 10.0kb upstream 13947 true Chr08: 46472912-46486858 Glycine max
Glyma.08G351100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 46476859-46486858 Glycine max
Glyma.08G351100 10.0kb downstream 10.0kb downstream 13947 true Chr08: 46462912-46476858 Glycine max
Glyma.08G351100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 46462912-46472911 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297583 5265 Fabidae View MSA
124050425 5270 Rosid View MSA
123749670 5271 Pentapetalae View MSA
122786653 5272 Eudicot View MSA
122050817 5273 Angiosperm View MSA
121348278 5274 Embryophyte View MSA
123380804 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.10033 0.0 35.1492    
cufflinks 22.1261 0.0 106.677 High High
cufflinks 6.60514 0.0 34.7053    
cufflinks 10.4607 0.0 51.2867    
cufflinks 4.32911 0.0 23.2151    
cufflinks 2.5968 0.0 14.3178   Low
cufflinks 12.2562 0.0 63.527    
cufflinks 10.5406 0.0 47.5235    
cufflinks 5.1254 0.0 27.9718    
cufflinks 0.562        
cufflinks 0.048     Low Low
cufflinks 0.713        
cufflinks 0.186        
cufflinks 0.271        
cufflinks 0.1       Low
cufflinks 0.612        
cufflinks 0.301        
cufflinks 0.485        
cufflinks 1.447       High
cufflinks 0.795        
cufflinks 0.072       Low
cufflinks 0.918        
cufflinks 1.391       High
cufflinks 0.078       Low
cufflinks 0.702        
cufflinks 0.135        

0 Strain