Gene : Glyma.08G352600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10799//PTHR10799:SF698 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED Genomic Order:  3526
Name:  ? Glyma.08G352600 Secondary Identifier:  ? PAC:30540301
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G352600 0.5kb upstream 0.5kb upstream 23408 true Chr08: 46556530-46579937 Glycine max
Glyma.08G352600 0.5kb upstream 0.5kb upstream 500 false Chr08: 46556530-46557029 Glycine max
Glyma.08G352600 0.5kb downstream 0.5kb downstream 23408 true Chr08: 46557030-46580437 Glycine max
Glyma.08G352600 0.5kb downstream 0.5kb downstream 500 false Chr08: 46579938-46580437 Glycine max
Glyma.08G352600 1.0kb upstream 1.0kb upstream 23908 true Chr08: 46556030-46579937 Glycine max
Glyma.08G352600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 46556030-46557029 Glycine max
Glyma.08G352600 1.0kb downstream 1.0kb downstream 23908 true Chr08: 46557030-46580937 Glycine max
Glyma.08G352600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 46579938-46580937 Glycine max
Glyma.08G352600 2.0kb upstream 2.0kb upstream 24908 true Chr08: 46555030-46579937 Glycine max
Glyma.08G352600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 46555030-46557029 Glycine max
Glyma.08G352600 2.0kb downstream 2.0kb downstream 24908 true Chr08: 46557030-46581937 Glycine max
Glyma.08G352600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 46579938-46581937 Glycine max
Glyma.08G352600 5.0kb upstream 5.0kb upstream 27908 true Chr08: 46552030-46579937 Glycine max
Glyma.08G352600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 46552030-46557029 Glycine max
Glyma.08G352600 5.0kb downstream 5.0kb downstream 27908 true Chr08: 46557030-46584937 Glycine max
Glyma.08G352600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 46579938-46584937 Glycine max
Glyma.08G352600 10.0kb upstream 10.0kb upstream 32908 true Chr08: 46547030-46579937 Glycine max
Glyma.08G352600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 46547030-46557029 Glycine max
Glyma.08G352600 10.0kb downstream 10.0kb downstream 32908 true Chr08: 46557030-46589937 Glycine max
Glyma.08G352600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 46579938-46589937 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026618 5273 Angiosperm View MSA
122304646 5265 Fabidae View MSA
124065375 5270 Rosid View MSA
123747187 5271 Pentapetalae View MSA
122790162 5272 Eudicot View MSA
121351372 5274 Embryophyte View MSA
123428399 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.1648 0.0 17.7145    
cufflinks 5.76702 0.0 19.9668    
cufflinks 6.99976 0.0 24.7936   High
cufflinks 4.61255 0.0 15.8216    
cufflinks 3.0489 0.0 10.5413   Low
cufflinks 2.37886 0.0 8.40847   Low
cufflinks 5.95272 0.0 20.9648    
cufflinks 3.82719 0.0 14.5292    
cufflinks 3.4876 0.0 13.3478    
cufflinks 0.315        
cufflinks 0.367        
cufflinks 0.471        
cufflinks 0.279       Low
cufflinks 0.28       Low
cufflinks 0.265       Low
cufflinks 0.766       High
cufflinks 0.293       Low
cufflinks 0.501        
cufflinks 0.742       High
cufflinks 0.729       High
cufflinks 0.308        
cufflinks 0.801       High
cufflinks 0.716       High
cufflinks 0.448        
cufflinks 0.724       High
cufflinks 0.443        

0 Strain