Gene : Glyma.08G336400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR32170:SF0 - PROTEIN T28B8.3, ISOFORM A-RELATED Genomic Order:  3364
Name:  ? Glyma.08G336400 Secondary Identifier:  ? PAC:30538466
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G336400 0.5kb upstream 0.5kb upstream 17376 true Chr08: 45333751-45351126 Glycine max
Glyma.08G336400 0.5kb upstream 0.5kb upstream 500 false Chr08: 45333751-45334250 Glycine max
Glyma.08G336400 0.5kb downstream 0.5kb downstream 17376 true Chr08: 45334251-45351626 Glycine max
Glyma.08G336400 0.5kb downstream 0.5kb downstream 500 false Chr08: 45351127-45351626 Glycine max
Glyma.08G336400 1.0kb upstream 1.0kb upstream 17876 true Chr08: 45333251-45351126 Glycine max
Glyma.08G336400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 45333251-45334250 Glycine max
Glyma.08G336400 1.0kb downstream 1.0kb downstream 17876 true Chr08: 45334251-45352126 Glycine max
Glyma.08G336400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 45351127-45352126 Glycine max
Glyma.08G336400 2.0kb upstream 2.0kb upstream 18876 true Chr08: 45332251-45351126 Glycine max
Glyma.08G336400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 45332251-45334250 Glycine max
Glyma.08G336400 2.0kb downstream 2.0kb downstream 18876 true Chr08: 45334251-45353126 Glycine max
Glyma.08G336400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 45351127-45353126 Glycine max
Glyma.08G336400 5.0kb upstream 5.0kb upstream 21876 true Chr08: 45329251-45351126 Glycine max
Glyma.08G336400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 45329251-45334250 Glycine max
Glyma.08G336400 5.0kb downstream 5.0kb downstream 21876 true Chr08: 45334251-45356126 Glycine max
Glyma.08G336400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 45351127-45356126 Glycine max
Glyma.08G336400 10.0kb upstream 10.0kb upstream 26876 true Chr08: 45324251-45351126 Glycine max
Glyma.08G336400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 45324251-45334250 Glycine max
Glyma.08G336400 10.0kb downstream 10.0kb downstream 26876 true Chr08: 45334251-45361126 Glycine max
Glyma.08G336400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 45351127-45361126 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302154 5265 Fabidae View MSA
124067212 5270 Rosid View MSA
123738466 5271 Pentapetalae View MSA
122787413 5272 Eudicot View MSA
122041914 5273 Angiosperm View MSA
121345239 5274 Embryophyte View MSA
123424572 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4036 0.0 49.7163    
cufflinks 10.9112 0.0 29.7952   Low
cufflinks 22.5058 0.0 66.9564 High High
cufflinks 19.1493 0.0 55.4717   High
cufflinks 11.3596 0.0 31.0681    
cufflinks 14.947 0.0 42.0117    
cufflinks 15.2929 0.0 42.9319    
cufflinks 12.0342 0.0 33.1262    
cufflinks 10.8741 0.0 29.6874   Low
cufflinks 4.669        
cufflinks 3.383       Low
cufflinks 6.989       High
cufflinks 6.566       High
cufflinks 5.717        
cufflinks 4.464        
cufflinks 4.348        
cufflinks 3.271       Low
cufflinks 7.213       High
cufflinks 5.842        
cufflinks 4.424        
cufflinks 3.446       Low
cufflinks 4.949        
cufflinks 4.892        
cufflinks 4.355        
cufflinks 4.426        
cufflinks 4.217        

0 Strain