Gene : Glyma.08G340400 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR10891:SF574 - CALCIUM-BINDING PROTEIN CML30-RELATED Genomic Order:  3404
Name:  ? Glyma.08G340400 Secondary Identifier:  ? PAC:30537277
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G340400 0.5kb upstream 0.5kb upstream 2517 true Chr08: 45657209-45659725 Glycine max
Glyma.08G340400 0.5kb upstream 0.5kb upstream 500 false Chr08: 45659226-45659725 Glycine max
Glyma.08G340400 0.5kb downstream 0.5kb downstream 2517 true Chr08: 45656709-45659225 Glycine max
Glyma.08G340400 0.5kb downstream 0.5kb downstream 500 false Chr08: 45656709-45657208 Glycine max
Glyma.08G340400 1.0kb upstream 1.0kb upstream 3017 true Chr08: 45657209-45660225 Glycine max
Glyma.08G340400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 45659226-45660225 Glycine max
Glyma.08G340400 1.0kb downstream 1.0kb downstream 3017 true Chr08: 45656209-45659225 Glycine max
Glyma.08G340400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 45656209-45657208 Glycine max
Glyma.08G340400 2.0kb upstream 2.0kb upstream 4017 true Chr08: 45657209-45661225 Glycine max
Glyma.08G340400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 45659226-45661225 Glycine max
Glyma.08G340400 2.0kb downstream 2.0kb downstream 4017 true Chr08: 45655209-45659225 Glycine max
Glyma.08G340400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 45655209-45657208 Glycine max
Glyma.08G340400 5.0kb upstream 5.0kb upstream 7017 true Chr08: 45657209-45664225 Glycine max
Glyma.08G340400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 45659226-45664225 Glycine max
Glyma.08G340400 5.0kb downstream 5.0kb downstream 7017 true Chr08: 45652209-45659225 Glycine max
Glyma.08G340400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 45652209-45657208 Glycine max
Glyma.08G340400 10.0kb upstream 10.0kb upstream 12017 true Chr08: 45657209-45669225 Glycine max
Glyma.08G340400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 45659226-45669225 Glycine max
Glyma.08G340400 10.0kb downstream 10.0kb downstream 12017 true Chr08: 45647209-45659225 Glycine max
Glyma.08G340400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 45647209-45657208 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026671 5273 Angiosperm View MSA
122308722 5265 Fabidae View MSA
124069517 5270 Rosid View MSA
123745725 5271 Pentapetalae View MSA
122794659 5272 Eudicot View MSA
121296467 5274 Embryophyte View MSA
123425898 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.414336 0.0 1.58822    
cufflinks 0.173867 0.0 0.693916 Low  
cufflinks 0.448792 0.0 3.94552    
cufflinks 6.16881 0.0 34.3549   High
cufflinks 0.517311 0.0 3.7223    
cufflinks 0.0500068 0.0 0.223927 Low Low
cufflinks 2.93085 0.0 21.5541    
cufflinks 3.1456 0.0 16.4544    
cufflinks 1.69053 0.0 13.4694    
cufflinks 0.344       High
cufflinks 0.096        
cufflinks 0.05     Low  
cufflinks 0.106        
cufflinks 0.009     Low Low
cufflinks 0.015     Low  
cufflinks 0.017     Low  
cufflinks 0.286       High
cufflinks 0.174       High
cufflinks 0.007     Low Low
cufflinks 0.025     Low  
cufflinks 0.083        
cufflinks 0.031     Low  
cufflinks 0.01     Low Low
cufflinks 0.107        
cufflinks 0.024     Low  
cufflinks 0.196       High

0 Strain