Gene : Glyma.08G340800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23084:SF156 - RADIAL SPOKE HEAD 10 HOMOLOG B2 Genomic Order:  3408
Name:  ? Glyma.08G340800 Secondary Identifier:  ? PAC:30536952
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6351 Glycine max pathologic  
Gmax PWY-6352 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G340800 0.5kb upstream 0.5kb upstream 4680 true Chr08: 45686153-45690832 Glycine max
Glyma.08G340800 0.5kb upstream 0.5kb upstream 500 false Chr08: 45686153-45686652 Glycine max
Glyma.08G340800 0.5kb downstream 0.5kb downstream 4680 true Chr08: 45686653-45691332 Glycine max
Glyma.08G340800 0.5kb downstream 0.5kb downstream 500 false Chr08: 45690833-45691332 Glycine max
Glyma.08G340800 1.0kb upstream 1.0kb upstream 5180 true Chr08: 45685653-45690832 Glycine max
Glyma.08G340800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 45685653-45686652 Glycine max
Glyma.08G340800 1.0kb downstream 1.0kb downstream 5180 true Chr08: 45686653-45691832 Glycine max
Glyma.08G340800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 45690833-45691832 Glycine max
Glyma.08G340800 2.0kb upstream 2.0kb upstream 6180 true Chr08: 45684653-45690832 Glycine max
Glyma.08G340800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 45684653-45686652 Glycine max
Glyma.08G340800 2.0kb downstream 2.0kb downstream 6180 true Chr08: 45686653-45692832 Glycine max
Glyma.08G340800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 45690833-45692832 Glycine max
Glyma.08G340800 5.0kb upstream 5.0kb upstream 9180 true Chr08: 45681653-45690832 Glycine max
Glyma.08G340800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 45681653-45686652 Glycine max
Glyma.08G340800 5.0kb downstream 5.0kb downstream 9180 true Chr08: 45686653-45695832 Glycine max
Glyma.08G340800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 45690833-45695832 Glycine max
Glyma.08G340800 10.0kb upstream 10.0kb upstream 14180 true Chr08: 45676653-45690832 Glycine max
Glyma.08G340800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 45676653-45686652 Glycine max
Glyma.08G340800 10.0kb downstream 10.0kb downstream 14180 true Chr08: 45686653-45700832 Glycine max
Glyma.08G340800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 45690833-45700832 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314429 5265 Fabidae View MSA
124068935 5270 Rosid View MSA
123741886 5271 Pentapetalae View MSA
122788830 5272 Eudicot View MSA
122047970 5273 Angiosperm View MSA
121346800 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.45172 0.0 12.774    
cufflinks 2.56316 0.0 7.96353   Low
cufflinks 8.12188 0.0 22.1142   High
cufflinks 4.98543 0.0 14.1514    
cufflinks 3.62412 0.0 10.6352    
cufflinks 8.82409 0.0 23.8597   High
cufflinks 3.78408 0.0 11.0591    
cufflinks 4.72513 0.0 13.5173    
cufflinks 3.86507 0.0 11.2947    
cufflinks 1.577       Low
cufflinks 2.937        
cufflinks 3.811       High
cufflinks 1.887        
cufflinks 1.556       Low
cufflinks 1.98        
cufflinks 2.352        
cufflinks 1.546       Low
cufflinks 3.132        
cufflinks 1.891        
cufflinks 2.557        
cufflinks 2.221        
cufflinks 2.814        
cufflinks 1.859        
cufflinks 3.318       High
cufflinks 2.555        
cufflinks 3.554       High

0 Strain