Gene : Glyma.08G340900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31773:SF11 - METACASPASE-2 Genomic Order:  3409
Name:  ? Glyma.08G340900 Secondary Identifier:  ? PAC:30540235
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G340900 0.5kb upstream 0.5kb upstream 6410 true Chr08: 45690768-45697177 Glycine max
Glyma.08G340900 0.5kb upstream 0.5kb upstream 500 false Chr08: 45690768-45691267 Glycine max
Glyma.08G340900 0.5kb downstream 0.5kb downstream 6410 true Chr08: 45691268-45697677 Glycine max
Glyma.08G340900 0.5kb downstream 0.5kb downstream 500 false Chr08: 45697178-45697677 Glycine max
Glyma.08G340900 1.0kb upstream 1.0kb upstream 6910 true Chr08: 45690268-45697177 Glycine max
Glyma.08G340900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 45690268-45691267 Glycine max
Glyma.08G340900 1.0kb downstream 1.0kb downstream 6910 true Chr08: 45691268-45698177 Glycine max
Glyma.08G340900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 45697178-45698177 Glycine max
Glyma.08G340900 2.0kb upstream 2.0kb upstream 7910 true Chr08: 45689268-45697177 Glycine max
Glyma.08G340900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 45689268-45691267 Glycine max
Glyma.08G340900 2.0kb downstream 2.0kb downstream 7910 true Chr08: 45691268-45699177 Glycine max
Glyma.08G340900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 45697178-45699177 Glycine max
Glyma.08G340900 5.0kb upstream 5.0kb upstream 10910 true Chr08: 45686268-45697177 Glycine max
Glyma.08G340900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 45686268-45691267 Glycine max
Glyma.08G340900 5.0kb downstream 5.0kb downstream 10910 true Chr08: 45691268-45702177 Glycine max
Glyma.08G340900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 45697178-45702177 Glycine max
Glyma.08G340900 10.0kb upstream 10.0kb upstream 15910 true Chr08: 45681268-45697177 Glycine max
Glyma.08G340900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 45681268-45691267 Glycine max
Glyma.08G340900 10.0kb downstream 10.0kb downstream 15910 true Chr08: 45691268-45707177 Glycine max
Glyma.08G340900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 45697178-45707177 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307763 5265 Fabidae View MSA
124073381 5270 Rosid View MSA
123741855 5271 Pentapetalae View MSA
122790648 5272 Eudicot View MSA
122050099 5273 Angiosperm View MSA
123428899 5275 Viridiplantae View MSA
121348125 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.59033 0.0 13.6091    
cufflinks 2.30471 0.0 7.54974   Low
cufflinks 3.99586 0.0 12.1148    
cufflinks 3.28883 0.0 10.2296    
cufflinks 5.12766 0.0 14.9341    
cufflinks 7.31065 0.0 20.4741   High
cufflinks 2.52 0.0 8.11569   Low
cufflinks 3.05684 0.0 9.6036    
cufflinks 3.94469 0.0 11.941    
cufflinks 1.354        
cufflinks 2.535       High
cufflinks 1.149        
cufflinks 1.731        
cufflinks 1.137        
cufflinks 1.207        
cufflinks 0.674       Low
cufflinks 2.229       High
cufflinks 0.927        
cufflinks 0.777        
cufflinks 0.645       Low
cufflinks 2.07        
cufflinks 0.7       Low
cufflinks 0.799        
cufflinks 2.436       High
cufflinks 0.594       Low
cufflinks 2.737       High

0 Strain