Gene : Glyma.08G342500 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR22870:SF138 - REGULATOR OF CHROMOSOME CONDENSATION DOMAIN-CONTAINING PROTEIN Genomic Order:  3425
Name:  ? Glyma.08G342500 Secondary Identifier:  ? PAC:30536862
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G342500 0.5kb upstream 0.5kb upstream 5628 true Chr08: 45794807-45800434 Glycine max
Glyma.08G342500 0.5kb upstream 0.5kb upstream 500 false Chr08: 45794807-45795306 Glycine max
Glyma.08G342500 0.5kb downstream 0.5kb downstream 5628 true Chr08: 45795307-45800934 Glycine max
Glyma.08G342500 0.5kb downstream 0.5kb downstream 500 false Chr08: 45800435-45800934 Glycine max
Glyma.08G342500 1.0kb upstream 1.0kb upstream 6128 true Chr08: 45794307-45800434 Glycine max
Glyma.08G342500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 45794307-45795306 Glycine max
Glyma.08G342500 1.0kb downstream 1.0kb downstream 6128 true Chr08: 45795307-45801434 Glycine max
Glyma.08G342500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 45800435-45801434 Glycine max
Glyma.08G342500 2.0kb upstream 2.0kb upstream 7128 true Chr08: 45793307-45800434 Glycine max
Glyma.08G342500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 45793307-45795306 Glycine max
Glyma.08G342500 2.0kb downstream 2.0kb downstream 7128 true Chr08: 45795307-45802434 Glycine max
Glyma.08G342500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 45800435-45802434 Glycine max
Glyma.08G342500 5.0kb upstream 5.0kb upstream 10128 true Chr08: 45790307-45800434 Glycine max
Glyma.08G342500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 45790307-45795306 Glycine max
Glyma.08G342500 5.0kb downstream 5.0kb downstream 10128 true Chr08: 45795307-45805434 Glycine max
Glyma.08G342500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 45800435-45805434 Glycine max
Glyma.08G342500 10.0kb upstream 10.0kb upstream 15128 true Chr08: 45785307-45800434 Glycine max
Glyma.08G342500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 45785307-45795306 Glycine max
Glyma.08G342500 10.0kb downstream 10.0kb downstream 15128 true Chr08: 45795307-45810434 Glycine max
Glyma.08G342500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 45800435-45810434 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303926 5265 Fabidae View MSA
124071462 5270 Rosid View MSA
123750397 5271 Pentapetalae View MSA
122786735 5272 Eudicot View MSA
122049165 5273 Angiosperm View MSA
121344608 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.32124 0.0 18.9067    
cufflinks 4.90603 0.0 21.2056    
cufflinks 3.15608 0.0 13.0802    
cufflinks 5.05283 0.0 24.2679    
cufflinks 4.61096 0.0 19.7843    
cufflinks 1.85837 0.0 6.76443   Low
cufflinks 4.81773 0.0 17.2017    
cufflinks 3.07576 0.0 9.73161    
cufflinks 3.96869 0.0 17.7079    
cufflinks 0.294        
cufflinks 0.243       Low
cufflinks 0.468        
cufflinks 0.501        
cufflinks 0.736       High
cufflinks 0.471        
cufflinks 0.518        
cufflinks 0.206       Low
cufflinks 0.53        
cufflinks 0.69       High
cufflinks 0.664       High
cufflinks 0.277       Low
cufflinks 0.582        
cufflinks 0.634        
cufflinks 0.287       Low
cufflinks 0.531        
cufflinks 0.294        

0 Strain