Gene : Glyma.08G345400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23130:SF95 - AUXIN-RESPONSIVE PROTEIN-RELATED Genomic Order:  3454
Name:  ? Glyma.08G345400 Secondary Identifier:  ? PAC:30539115
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G345400 0.5kb upstream 0.5kb upstream 3057 true Chr08: 46036476-46039532 Glycine max
Glyma.08G345400 0.5kb upstream 0.5kb upstream 500 false Chr08: 46039033-46039532 Glycine max
Glyma.08G345400 0.5kb downstream 0.5kb downstream 3057 true Chr08: 46035976-46039032 Glycine max
Glyma.08G345400 0.5kb downstream 0.5kb downstream 500 false Chr08: 46035976-46036475 Glycine max
Glyma.08G345400 1.0kb upstream 1.0kb upstream 3557 true Chr08: 46036476-46040032 Glycine max
Glyma.08G345400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 46039033-46040032 Glycine max
Glyma.08G345400 1.0kb downstream 1.0kb downstream 3557 true Chr08: 46035476-46039032 Glycine max
Glyma.08G345400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 46035476-46036475 Glycine max
Glyma.08G345400 2.0kb upstream 2.0kb upstream 4557 true Chr08: 46036476-46041032 Glycine max
Glyma.08G345400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 46039033-46041032 Glycine max
Glyma.08G345400 2.0kb downstream 2.0kb downstream 4557 true Chr08: 46034476-46039032 Glycine max
Glyma.08G345400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 46034476-46036475 Glycine max
Glyma.08G345400 5.0kb upstream 5.0kb upstream 7557 true Chr08: 46036476-46044032 Glycine max
Glyma.08G345400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 46039033-46044032 Glycine max
Glyma.08G345400 5.0kb downstream 5.0kb downstream 7557 true Chr08: 46031476-46039032 Glycine max
Glyma.08G345400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 46031476-46036475 Glycine max
Glyma.08G345400 10.0kb upstream 10.0kb upstream 12557 true Chr08: 46036476-46049032 Glycine max
Glyma.08G345400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 46039033-46049032 Glycine max
Glyma.08G345400 10.0kb downstream 10.0kb downstream 12557 true Chr08: 46026476-46039032 Glycine max
Glyma.08G345400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 46026476-46036475 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309050 5265 Fabidae View MSA
124072358 5270 Rosid View MSA
123745373 5271 Pentapetalae View MSA
122787845 5272 Eudicot View MSA
122050744 5273 Angiosperm View MSA
121348347 5274 Embryophyte View MSA
123428624 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.86166 0.0 26.9862    
cufflinks 9.78966 0.0 26.8517    
cufflinks 17.8426 0.0 47.6527    
cufflinks 40.661 0.0 111.269 High  
cufflinks 31.0097 0.0 83.6468 High  
cufflinks 0.886044 0.0 3.1843   Low
cufflinks 11.4171 0.0 30.9005    
cufflinks 47.7066 0.0 132.499 High  
cufflinks 32.4963 0.0 87.7884 High  
cufflinks 16.936     High High
cufflinks 2.859        
cufflinks 9.03     High  
cufflinks 2.662        
cufflinks 1.161       Low
cufflinks 14.302     High High
cufflinks 6.869        
cufflinks 2.423        
cufflinks 7.102        
cufflinks 5.638        
cufflinks 7.696     High  
cufflinks 1.9       Low
cufflinks 7.496     High  
cufflinks 6.431        
cufflinks 1.684       Low
cufflinks 6.854        
cufflinks 1.581       Low

0 Strain