Gene : Glyma.09G019700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12758:SF20 - PEPTIDASE-C1 DOMAIN-CONTAINING PROTEIN Genomic Order:  197
Name:  ? Glyma.09G019700 Secondary Identifier:  ? PAC:30484403
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G019700 0.5kb upstream 0.5kb upstream 6693 true Chr09: 1530313-1537005 Glycine max
Glyma.09G019700 0.5kb upstream 0.5kb upstream 500 false Chr09: 1536506-1537005 Glycine max
Glyma.09G019700 0.5kb downstream 0.5kb downstream 6693 true Chr09: 1529813-1536505 Glycine max
Glyma.09G019700 0.5kb downstream 0.5kb downstream 500 false Chr09: 1529813-1530312 Glycine max
Glyma.09G019700 1.0kb upstream 1.0kb upstream 7193 true Chr09: 1530313-1537505 Glycine max
Glyma.09G019700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 1536506-1537505 Glycine max
Glyma.09G019700 1.0kb downstream 1.0kb downstream 7193 true Chr09: 1529313-1536505 Glycine max
Glyma.09G019700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 1529313-1530312 Glycine max
Glyma.09G019700 2.0kb upstream 2.0kb upstream 8193 true Chr09: 1530313-1538505 Glycine max
Glyma.09G019700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 1536506-1538505 Glycine max
Glyma.09G019700 2.0kb downstream 2.0kb downstream 8193 true Chr09: 1528313-1536505 Glycine max
Glyma.09G019700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 1528313-1530312 Glycine max
Glyma.09G019700 5.0kb upstream 5.0kb upstream 11193 true Chr09: 1530313-1541505 Glycine max
Glyma.09G019700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 1536506-1541505 Glycine max
Glyma.09G019700 5.0kb downstream 5.0kb downstream 11193 true Chr09: 1525313-1536505 Glycine max
Glyma.09G019700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 1525313-1530312 Glycine max
Glyma.09G019700 10.0kb upstream 10.0kb upstream 16193 true Chr09: 1530313-1546505 Glycine max
Glyma.09G019700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 1536506-1546505 Glycine max
Glyma.09G019700 10.0kb downstream 10.0kb downstream 16193 true Chr09: 1520313-1536505 Glycine max
Glyma.09G019700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 1520313-1530312 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253846 5265 Fabidae View MSA
124065428 5270 Rosid View MSA
123746895 5271 Pentapetalae View MSA
122790736 5272 Eudicot View MSA
122047754 5273 Angiosperm View MSA
121350111 5274 Embryophyte View MSA
123424635 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.2608 0.0 86.9467   High
cufflinks 15.6109 0.0 67.3516    
cufflinks 11.586 0.0 48.5152    
cufflinks 11.4585 0.0 48.2394    
cufflinks 15.4876 0.0 66.9044    
cufflinks 10.399 0.0 36.351   Low
cufflinks 18.6172 0.0 83.8361   High
cufflinks 12.8391 0.0 54.164    
cufflinks 11.1047 0.0 47.3303    
cufflinks 1.31        
cufflinks 0.594       Low
cufflinks 1.22        
cufflinks 1.413        
cufflinks 1.652        
cufflinks 0.791        
cufflinks 1.942        
cufflinks 0.659       Low
cufflinks 1.291        
cufflinks 2.179       High
cufflinks 2.1       High
cufflinks 0.762       Low
cufflinks 2.158       High
cufflinks 2.114       High
cufflinks 0.769       Low
cufflinks 1.96        
cufflinks 0.728       Low

0 Strain