Gene : Glyma.09G013900 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR10343:SF51 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 Genomic Order:  139
Name:  ? Glyma.09G013900 Secondary Identifier:  ? PAC:30484664
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G013900 0.5kb upstream 0.5kb upstream 3946 true Chr09: 1043486-1047431 Glycine max
Glyma.09G013900 0.5kb upstream 0.5kb upstream 500 false Chr09: 1046932-1047431 Glycine max
Glyma.09G013900 0.5kb downstream 0.5kb downstream 3946 true Chr09: 1042986-1046931 Glycine max
Glyma.09G013900 0.5kb downstream 0.5kb downstream 500 false Chr09: 1042986-1043485 Glycine max
Glyma.09G013900 1.0kb upstream 1.0kb upstream 4446 true Chr09: 1043486-1047931 Glycine max
Glyma.09G013900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 1046932-1047931 Glycine max
Glyma.09G013900 1.0kb downstream 1.0kb downstream 4446 true Chr09: 1042486-1046931 Glycine max
Glyma.09G013900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 1042486-1043485 Glycine max
Glyma.09G013900 2.0kb upstream 2.0kb upstream 5446 true Chr09: 1043486-1048931 Glycine max
Glyma.09G013900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 1046932-1048931 Glycine max
Glyma.09G013900 2.0kb downstream 2.0kb downstream 5446 true Chr09: 1041486-1046931 Glycine max
Glyma.09G013900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 1041486-1043485 Glycine max
Glyma.09G013900 5.0kb upstream 5.0kb upstream 8446 true Chr09: 1043486-1051931 Glycine max
Glyma.09G013900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 1046932-1051931 Glycine max
Glyma.09G013900 5.0kb downstream 5.0kb downstream 8446 true Chr09: 1038486-1046931 Glycine max
Glyma.09G013900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 1038486-1043485 Glycine max
Glyma.09G013900 10.0kb upstream 10.0kb upstream 13446 true Chr09: 1043486-1056931 Glycine max
Glyma.09G013900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 1046932-1056931 Glycine max
Glyma.09G013900 10.0kb downstream 10.0kb downstream 13446 true Chr09: 1033486-1046931 Glycine max
Glyma.09G013900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 1033486-1043485 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308505 5265 Fabidae View MSA
124063365 5270 Rosid View MSA
123740870 5271 Pentapetalae View MSA
122792277 5272 Eudicot View MSA
122041753 5273 Angiosperm View MSA
121345261 5274 Embryophyte View MSA
123426874 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.44052 0.0 25.9369    
cufflinks 8.74517 0.0 24.1794    
cufflinks 1.85276 0.0 6.23823   Low
cufflinks 8.79039 0.0 24.2696    
cufflinks 5.76975 0.0 16.6636    
cufflinks 3.94473 0.0 11.9973    
cufflinks 26.0071 0.0 69.6105 High High
cufflinks 6.42381 0.0 18.264    
cufflinks 6.59046 0.0 18.716    
cufflinks 2.98        
cufflinks 0.34       Low
cufflinks 2.198        
cufflinks 1.807        
cufflinks 1.971        
cufflinks 0.68        
cufflinks 3.532        
cufflinks 0.893        
cufflinks 2.954        
cufflinks 3.463        
cufflinks 3.889        
cufflinks 0.43       Low
cufflinks 4.108       High
cufflinks 3.686        
cufflinks 0.35       Low
cufflinks 3.324        
cufflinks 0.958        

0 Strain