Gene : Glyma.09G014100 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED Genomic Order:  141
Name:  ? Glyma.09G014100 Secondary Identifier:  ? PAC:30485348
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G014100 0.5kb upstream 0.5kb upstream 2036 true Chr09: 1057653-1059688 Glycine max
Glyma.09G014100 0.5kb upstream 0.5kb upstream 500 false Chr09: 1057653-1058152 Glycine max
Glyma.09G014100 0.5kb downstream 0.5kb downstream 2036 true Chr09: 1058153-1060188 Glycine max
Glyma.09G014100 0.5kb downstream 0.5kb downstream 500 false Chr09: 1059689-1060188 Glycine max
Glyma.09G014100 1.0kb upstream 1.0kb upstream 2536 true Chr09: 1057153-1059688 Glycine max
Glyma.09G014100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 1057153-1058152 Glycine max
Glyma.09G014100 1.0kb downstream 1.0kb downstream 2536 true Chr09: 1058153-1060688 Glycine max
Glyma.09G014100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 1059689-1060688 Glycine max
Glyma.09G014100 2.0kb upstream 2.0kb upstream 3536 true Chr09: 1056153-1059688 Glycine max
Glyma.09G014100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 1056153-1058152 Glycine max
Glyma.09G014100 2.0kb downstream 2.0kb downstream 3536 true Chr09: 1058153-1061688 Glycine max
Glyma.09G014100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 1059689-1061688 Glycine max
Glyma.09G014100 5.0kb upstream 5.0kb upstream 6536 true Chr09: 1053153-1059688 Glycine max
Glyma.09G014100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 1053153-1058152 Glycine max
Glyma.09G014100 5.0kb downstream 5.0kb downstream 6536 true Chr09: 1058153-1064688 Glycine max
Glyma.09G014100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 1059689-1064688 Glycine max
Glyma.09G014100 10.0kb upstream 10.0kb upstream 11536 true Chr09: 1048153-1059688 Glycine max
Glyma.09G014100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 1048153-1058152 Glycine max
Glyma.09G014100 10.0kb downstream 10.0kb downstream 11536 true Chr09: 1058153-1069688 Glycine max
Glyma.09G014100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 1059689-1069688 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296269 5265 Fabidae View MSA
124072305 5270 Rosid View MSA
123751737 5271 Pentapetalae View MSA
122797656 5272 Eudicot View MSA
122048596 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.4905 0.0 41.6556    
cufflinks 3.30633 0.0 10.4825    
cufflinks 5.00134 0.0 14.8852    
cufflinks 7.12615 0.0 20.3389    
cufflinks 9.74114 0.0 26.951    
cufflinks 2.73683 0.0 8.92412    
cufflinks 0.49449 0.0 1.85057   Low
cufflinks 18.6785 0.0 49.9395    
cufflinks 23.9575 0.0 63.9221 High High
cufflinks 2.655        
cufflinks 2.529        
cufflinks 3.508        
cufflinks 6.856       High
cufflinks 0.616       Low
cufflinks 10.329     High High
cufflinks 0.849        
cufflinks 2.66        
cufflinks 0.851        
cufflinks 2.034        
cufflinks 0.709       Low
cufflinks 2.637        
cufflinks 0.976        
cufflinks 1.027        
cufflinks 2.943        
cufflinks 0.829       Low
cufflinks 3.052        

0 Strain