Gene : Glyma.09G018100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31807:SF6 - PROTEIN ENDOSPERM DEFECTIVE 1-RELATED Genomic Order:  181
Name:  ? Glyma.09G018100 Secondary Identifier:  ? PAC:30487057
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G018100 0.5kb upstream 0.5kb upstream 4641 true Chr09: 1416403-1421043 Glycine max
Glyma.09G018100 0.5kb upstream 0.5kb upstream 500 false Chr09: 1420544-1421043 Glycine max
Glyma.09G018100 0.5kb downstream 0.5kb downstream 4641 true Chr09: 1415903-1420543 Glycine max
Glyma.09G018100 0.5kb downstream 0.5kb downstream 500 false Chr09: 1415903-1416402 Glycine max
Glyma.09G018100 1.0kb upstream 1.0kb upstream 5141 true Chr09: 1416403-1421543 Glycine max
Glyma.09G018100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 1420544-1421543 Glycine max
Glyma.09G018100 1.0kb downstream 1.0kb downstream 5141 true Chr09: 1415403-1420543 Glycine max
Glyma.09G018100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 1415403-1416402 Glycine max
Glyma.09G018100 2.0kb upstream 2.0kb upstream 6141 true Chr09: 1416403-1422543 Glycine max
Glyma.09G018100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 1420544-1422543 Glycine max
Glyma.09G018100 2.0kb downstream 2.0kb downstream 6141 true Chr09: 1414403-1420543 Glycine max
Glyma.09G018100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 1414403-1416402 Glycine max
Glyma.09G018100 5.0kb upstream 5.0kb upstream 9141 true Chr09: 1416403-1425543 Glycine max
Glyma.09G018100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 1420544-1425543 Glycine max
Glyma.09G018100 5.0kb downstream 5.0kb downstream 9141 true Chr09: 1411403-1420543 Glycine max
Glyma.09G018100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 1411403-1416402 Glycine max
Glyma.09G018100 10.0kb upstream 10.0kb upstream 14141 true Chr09: 1416403-1430543 Glycine max
Glyma.09G018100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 1420544-1430543 Glycine max
Glyma.09G018100 10.0kb downstream 10.0kb downstream 14141 true Chr09: 1406403-1420543 Glycine max
Glyma.09G018100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 1406403-1416402 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309438 5265 Fabidae View MSA
124067070 5270 Rosid View MSA
123752575 5271 Pentapetalae View MSA
122788375 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.36795 0.0 4.54824    
cufflinks 0.108939 0.0 0.425176 Low Low
cufflinks 0.525422 0.0 1.90231    
cufflinks 1.09668 0.0 3.73912    
cufflinks 0.777762 0.0 2.7392    
cufflinks 0.590166 0.0 2.11995    
cufflinks 1.00175 0.0 3.44433    
cufflinks 0.898855 0.0 3.12758    
cufflinks 0.509        
cufflinks 0.094        
cufflinks 0.273        
cufflinks 1.205        
cufflinks 1.129        
cufflinks 0.014     Low Low
cufflinks 1.363        
cufflinks 0.138        
cufflinks 0.254        
cufflinks 1.063        
cufflinks 1.442        
cufflinks 0.118        
cufflinks 1.318        
cufflinks 1.338        
cufflinks 0.064       Low
cufflinks 1.125        
cufflinks 0.197        

0 Strain