Gene : Glyma.09G018200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10110:SF119 - SODIUM/HYDROGEN EXCHANGER 5-RELATED Genomic Order:  182
Name:  ? Glyma.09G018200 Secondary Identifier:  ? PAC:30484645
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G018200 0.5kb upstream 0.5kb upstream 8237 true Chr09: 1422215-1430451 Glycine max
Glyma.09G018200 0.5kb upstream 0.5kb upstream 500 false Chr09: 1429952-1430451 Glycine max
Glyma.09G018200 0.5kb downstream 0.5kb downstream 8237 true Chr09: 1421715-1429951 Glycine max
Glyma.09G018200 0.5kb downstream 0.5kb downstream 500 false Chr09: 1421715-1422214 Glycine max
Glyma.09G018200 1.0kb upstream 1.0kb upstream 8737 true Chr09: 1422215-1430951 Glycine max
Glyma.09G018200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 1429952-1430951 Glycine max
Glyma.09G018200 1.0kb downstream 1.0kb downstream 8737 true Chr09: 1421215-1429951 Glycine max
Glyma.09G018200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 1421215-1422214 Glycine max
Glyma.09G018200 2.0kb upstream 2.0kb upstream 9737 true Chr09: 1422215-1431951 Glycine max
Glyma.09G018200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 1429952-1431951 Glycine max
Glyma.09G018200 2.0kb downstream 2.0kb downstream 9737 true Chr09: 1420215-1429951 Glycine max
Glyma.09G018200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 1420215-1422214 Glycine max
Glyma.09G018200 5.0kb upstream 5.0kb upstream 12737 true Chr09: 1422215-1434951 Glycine max
Glyma.09G018200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 1429952-1434951 Glycine max
Glyma.09G018200 5.0kb downstream 5.0kb downstream 12737 true Chr09: 1417215-1429951 Glycine max
Glyma.09G018200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 1417215-1422214 Glycine max
Glyma.09G018200 10.0kb upstream 10.0kb upstream 17737 true Chr09: 1422215-1439951 Glycine max
Glyma.09G018200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 1429952-1439951 Glycine max
Glyma.09G018200 10.0kb downstream 10.0kb downstream 17737 true Chr09: 1412215-1429951 Glycine max
Glyma.09G018200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 1412215-1422214 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028250 5273 Angiosperm View MSA
122301524 5265 Fabidae View MSA
124075080 5270 Rosid View MSA
123740997 5271 Pentapetalae View MSA
122793051 5272 Eudicot View MSA
121351588 5274 Embryophyte View MSA
123428503 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.6296 0.0 28.6179    
cufflinks 7.3119 0.0 20.1257    
cufflinks 23.257 0.0 62.5312 High High
cufflinks 10.4681 0.0 28.1923    
cufflinks 6.84875 0.0 18.9728   Low
cufflinks 10.802 0.0 29.0429    
cufflinks 8.27354 0.0 22.6142    
cufflinks 10.0763 0.0 27.1812    
cufflinks 10.4989 0.0 28.2697    
cufflinks 1.784        
cufflinks 2.102        
cufflinks 5.1       High
cufflinks 1.627       Low
cufflinks 1.433       Low
cufflinks 2.166        
cufflinks 2.111        
cufflinks 2.063        
cufflinks 4.186       High
cufflinks 2.596        
cufflinks 2.254        
cufflinks 1.907        
cufflinks 2.573        
cufflinks 2.032        
cufflinks 2.244        
cufflinks 2.201        
cufflinks 1.872        

0 Strain