Gene : Glyma.09G007500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11850:SF100 - HOMEOBOX PROTEIN SHOOT MERISTEMLESS Genomic Order:  75
Name:  ? Glyma.09G007500 Secondary Identifier:  ? PAC:30484861
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G007500 0.5kb upstream 0.5kb upstream 8197 true Chr09: 541070-549266 Glycine max
Glyma.09G007500 0.5kb upstream 0.5kb upstream 500 false Chr09: 548767-549266 Glycine max
Glyma.09G007500 0.5kb downstream 0.5kb downstream 8197 true Chr09: 540570-548766 Glycine max
Glyma.09G007500 0.5kb downstream 0.5kb downstream 500 false Chr09: 540570-541069 Glycine max
Glyma.09G007500 1.0kb upstream 1.0kb upstream 8697 true Chr09: 541070-549766 Glycine max
Glyma.09G007500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 548767-549766 Glycine max
Glyma.09G007500 1.0kb downstream 1.0kb downstream 8697 true Chr09: 540070-548766 Glycine max
Glyma.09G007500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 540070-541069 Glycine max
Glyma.09G007500 2.0kb upstream 2.0kb upstream 9697 true Chr09: 541070-550766 Glycine max
Glyma.09G007500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 548767-550766 Glycine max
Glyma.09G007500 2.0kb downstream 2.0kb downstream 9697 true Chr09: 539070-548766 Glycine max
Glyma.09G007500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 539070-541069 Glycine max
Glyma.09G007500 5.0kb upstream 5.0kb upstream 12697 true Chr09: 541070-553766 Glycine max
Glyma.09G007500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 548767-553766 Glycine max
Glyma.09G007500 5.0kb downstream 5.0kb downstream 12697 true Chr09: 536070-548766 Glycine max
Glyma.09G007500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 536070-541069 Glycine max
Glyma.09G007500 10.0kb upstream 10.0kb upstream 17697 true Chr09: 541070-558766 Glycine max
Glyma.09G007500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 548767-558766 Glycine max
Glyma.09G007500 10.0kb downstream 10.0kb downstream 17697 true Chr09: 531070-548766 Glycine max
Glyma.09G007500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 531070-541069 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313225 5265 Fabidae View MSA
124072037 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.16231 0.0 10.9828    
cufflinks 6.13814 0.0 18.0461    
cufflinks 0.92296 0.0 5.67973    
cufflinks 2.6855 0.0 9.83471    
cufflinks 0.099473 0.0 0.393277 Low Low
cufflinks 1.42495 0.0 6.42553    
cufflinks 11.6374 0.0 43.0614   High
cufflinks 0.487249 0.0 2.53669    
cufflinks 0.428        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.485       High
cufflinks 0.028     Low  
cufflinks 0.151        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.021     Low  
cufflinks 0.787       High
cufflinks 0.291        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low

0 Strain