Gene : Glyma.09G008100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31906:SF5 - PLASTID-LIPID-ASSOCIATED PROTEIN 3, CHLOROPLASTIC-RELATED Genomic Order:  81
Name:  ? Glyma.09G008100 Secondary Identifier:  ? PAC:30483920
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G008100 0.5kb upstream 0.5kb upstream 2253 true Chr09: 627003-629255 Glycine max
Glyma.09G008100 0.5kb upstream 0.5kb upstream 500 false Chr09: 628756-629255 Glycine max
Glyma.09G008100 0.5kb downstream 0.5kb downstream 2253 true Chr09: 626503-628755 Glycine max
Glyma.09G008100 0.5kb downstream 0.5kb downstream 500 false Chr09: 626503-627002 Glycine max
Glyma.09G008100 1.0kb upstream 1.0kb upstream 2753 true Chr09: 627003-629755 Glycine max
Glyma.09G008100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 628756-629755 Glycine max
Glyma.09G008100 1.0kb downstream 1.0kb downstream 2753 true Chr09: 626003-628755 Glycine max
Glyma.09G008100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 626003-627002 Glycine max
Glyma.09G008100 2.0kb upstream 2.0kb upstream 3753 true Chr09: 627003-630755 Glycine max
Glyma.09G008100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 628756-630755 Glycine max
Glyma.09G008100 2.0kb downstream 2.0kb downstream 3753 true Chr09: 625003-628755 Glycine max
Glyma.09G008100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 625003-627002 Glycine max
Glyma.09G008100 5.0kb upstream 5.0kb upstream 6753 true Chr09: 627003-633755 Glycine max
Glyma.09G008100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 628756-633755 Glycine max
Glyma.09G008100 5.0kb downstream 5.0kb downstream 6753 true Chr09: 622003-628755 Glycine max
Glyma.09G008100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 622003-627002 Glycine max
Glyma.09G008100 10.0kb upstream 10.0kb upstream 11753 true Chr09: 627003-638755 Glycine max
Glyma.09G008100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 628756-638755 Glycine max
Glyma.09G008100 10.0kb downstream 10.0kb downstream 11753 true Chr09: 617003-628755 Glycine max
Glyma.09G008100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 617003-627002 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303494 5265 Fabidae View MSA
124073246 5270 Rosid View MSA
123747312 5271 Pentapetalae View MSA
122796946 5272 Eudicot View MSA
122048215 5273 Angiosperm View MSA
121346450 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.6605 0.0 118.877 High High
cufflinks 13.6248 0.0 36.944    
cufflinks 35.9095 0.0 96.5154 High  
cufflinks 14.1777 0.0 38.346    
cufflinks 8.56575 0.0 23.9933   Low
cufflinks 19.3658 0.0 51.7651    
cufflinks 60.7937 0.0 170.136 High High
cufflinks 12.8257 0.0 34.8726    
cufflinks 8.83589 0.0 24.7262   Low
cufflinks 16.016     High High
cufflinks 3.724       Low
cufflinks 24.229     High High
cufflinks 8.248     High  
cufflinks 2.948       Low
cufflinks 3.717       Low
cufflinks 10.627     High  
cufflinks 20.389     High High
cufflinks 10.874     High  
cufflinks 11.169     High  
cufflinks 6.752        
cufflinks 4.747        
cufflinks 9.897     High  
cufflinks 10.907     High  
cufflinks 3.104       Low
cufflinks 9.673     High  
cufflinks 5.361        

0 Strain