Gene : Glyma.09G009900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13011 - TFIIF-ALPHA Genomic Order:  99
Name:  ? Glyma.09G009900 Secondary Identifier:  ? PAC:30483287
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G009900 0.5kb upstream 0.5kb upstream 6384 true Chr09: 774781-781164 Glycine max
Glyma.09G009900 0.5kb upstream 0.5kb upstream 500 false Chr09: 780665-781164 Glycine max
Glyma.09G009900 0.5kb downstream 0.5kb downstream 6384 true Chr09: 774281-780664 Glycine max
Glyma.09G009900 0.5kb downstream 0.5kb downstream 500 false Chr09: 774281-774780 Glycine max
Glyma.09G009900 1.0kb upstream 1.0kb upstream 6884 true Chr09: 774781-781664 Glycine max
Glyma.09G009900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 780665-781664 Glycine max
Glyma.09G009900 1.0kb downstream 1.0kb downstream 6884 true Chr09: 773781-780664 Glycine max
Glyma.09G009900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 773781-774780 Glycine max
Glyma.09G009900 2.0kb upstream 2.0kb upstream 7884 true Chr09: 774781-782664 Glycine max
Glyma.09G009900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 780665-782664 Glycine max
Glyma.09G009900 2.0kb downstream 2.0kb downstream 7884 true Chr09: 772781-780664 Glycine max
Glyma.09G009900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 772781-774780 Glycine max
Glyma.09G009900 5.0kb upstream 5.0kb upstream 10884 true Chr09: 774781-785664 Glycine max
Glyma.09G009900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 780665-785664 Glycine max
Glyma.09G009900 5.0kb downstream 5.0kb downstream 10884 true Chr09: 769781-780664 Glycine max
Glyma.09G009900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 769781-774780 Glycine max
Glyma.09G009900 10.0kb upstream 10.0kb upstream 15884 true Chr09: 774781-790664 Glycine max
Glyma.09G009900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 780665-790664 Glycine max
Glyma.09G009900 10.0kb downstream 10.0kb downstream 15884 true Chr09: 764781-780664 Glycine max
Glyma.09G009900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 764781-774780 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314295 5265 Fabidae View MSA
124061584 5270 Rosid View MSA
123740754 5271 Pentapetalae View MSA
122785795 5272 Eudicot View MSA
122042161 5273 Angiosperm View MSA
121347251 5274 Embryophyte View MSA
123426399 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.432 0.0 40.572   High
cufflinks 8.58477 0.0 28.5753   Low
cufflinks 13.3054 0.0 40.5542   High
cufflinks 11.4431 0.0 37.0558    
cufflinks 8.55019 0.0 25.6696   Low
cufflinks 9.97813 0.0 29.612    
cufflinks 9.94544 0.0 35.5494    
cufflinks 14.0598 0.0 42.3533   High
cufflinks 8.49685 0.0 25.5236   Low
cufflinks 6.82        
cufflinks 3.422       Low
cufflinks 7.481     High  
cufflinks 5.457        
cufflinks 5.813        
cufflinks 3.143       Low
cufflinks 7.206     High  
cufflinks 6.11     High  
cufflinks 7.565     High  
cufflinks 5.639        
cufflinks 7.19     High  
cufflinks 4.143       Low
cufflinks 8.085     High High
cufflinks 6.616        
cufflinks 4.951        
cufflinks 6.966     High  
cufflinks 4.264       Low

0 Strain