Gene : Glyma.09G000100 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR22731//PTHR22731:SF9 - RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 Genomic Order:  1
Name:  ? Glyma.09G000100 Secondary Identifier:  ? PAC:30486121
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G000100 0.5kb upstream 0.5kb upstream 16342 true Chr09: 1720-18061 Glycine max
Glyma.09G000100 0.5kb upstream 0.5kb upstream 500 false Chr09: 17562-18061 Glycine max
Glyma.09G000100 0.5kb downstream 0.5kb downstream 16342 true Chr09: 1220-17561 Glycine max
Glyma.09G000100 0.5kb downstream 0.5kb downstream 500 false Chr09: 1220-1719 Glycine max
Glyma.09G000100 1.0kb upstream 1.0kb upstream 16842 true Chr09: 1720-18561 Glycine max
Glyma.09G000100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 17562-18561 Glycine max
Glyma.09G000100 1.0kb downstream 1.0kb downstream 16842 true Chr09: 720-17561 Glycine max
Glyma.09G000100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 720-1719 Glycine max
Glyma.09G000100 2.0kb upstream 2.0kb upstream 17842 true Chr09: 1720-19561 Glycine max
Glyma.09G000100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 17562-19561 Glycine max
Glyma.09G000100 2.0kb downstream 2.0kb downstream 17561 true Chr09: 1-17561 Glycine max
Glyma.09G000100 2.0kb downstream 2.0kb downstream 1719 false Chr09: 1-1719 Glycine max
Glyma.09G000100 5.0kb upstream 5.0kb upstream 20842 true Chr09: 1720-22561 Glycine max
Glyma.09G000100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 17562-22561 Glycine max
Glyma.09G000100 5.0kb downstream 5.0kb downstream 17561 true Chr09: 1-17561 Glycine max
Glyma.09G000100 5.0kb downstream 5.0kb downstream 1719 false Chr09: 1-1719 Glycine max
Glyma.09G000100 10.0kb upstream 10.0kb upstream 25842 true Chr09: 1720-27561 Glycine max
Glyma.09G000100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 17562-27561 Glycine max
Glyma.09G000100 10.0kb downstream 10.0kb downstream 17561 true Chr09: 1-17561 Glycine max
Glyma.09G000100 10.0kb downstream 10.0kb downstream 1719 false Chr09: 1-1719 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121615379 5273 Angiosperm View MSA
122250252 5265 Fabidae View MSA
123993516 5270 Rosid View MSA
123568283 5271 Pentapetalae View MSA
122603029 5272 Eudicot View MSA
120887573 5274 Embryophyte View MSA
122928327 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.58178 0.0 5.04069   High
cufflinks 0.888647 0.0 3.39048    
cufflinks 0.517392 0.0 2.20573   Low
cufflinks 0.957523 0.0 3.49616    
cufflinks 0.976841 0.0 3.53775    
cufflinks 0.731635 0.0 2.92703    
cufflinks 1.19761 0.0 4.051    
cufflinks 0.595598 0.0 2.5096   Low
cufflinks 0.746561 0.0 2.83682    
cufflinks 0.089     Low  
cufflinks 0.101        
cufflinks 0.123        
cufflinks 0.111        
cufflinks 0.105        
cufflinks 0.19       High
cufflinks 0.116        
cufflinks 0.057     Low Low
cufflinks 0.121        
cufflinks 0.193       High
cufflinks 0.129        
cufflinks 0.098        
cufflinks 0.155        
cufflinks 0.185       High
cufflinks 0.07       Low
cufflinks 0.22       High
cufflinks 0.095        

0 Strain