Gene : Glyma.09G002200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12953:SF1 - GALACTOSE-BINDING PROTEIN Genomic Order:  22
Name:  ? Glyma.09G002200 Secondary Identifier:  ? PAC:30483707
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G002200 0.5kb upstream 0.5kb upstream 3659 true Chr09: 172521-176179 Glycine max
Glyma.09G002200 0.5kb upstream 0.5kb upstream 500 false Chr09: 175680-176179 Glycine max
Glyma.09G002200 0.5kb downstream 0.5kb downstream 3659 true Chr09: 172021-175679 Glycine max
Glyma.09G002200 0.5kb downstream 0.5kb downstream 500 false Chr09: 172021-172520 Glycine max
Glyma.09G002200 1.0kb upstream 1.0kb upstream 4159 true Chr09: 172521-176679 Glycine max
Glyma.09G002200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 175680-176679 Glycine max
Glyma.09G002200 1.0kb downstream 1.0kb downstream 4159 true Chr09: 171521-175679 Glycine max
Glyma.09G002200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 171521-172520 Glycine max
Glyma.09G002200 2.0kb upstream 2.0kb upstream 5159 true Chr09: 172521-177679 Glycine max
Glyma.09G002200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 175680-177679 Glycine max
Glyma.09G002200 2.0kb downstream 2.0kb downstream 5159 true Chr09: 170521-175679 Glycine max
Glyma.09G002200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 170521-172520 Glycine max
Glyma.09G002200 5.0kb upstream 5.0kb upstream 8159 true Chr09: 172521-180679 Glycine max
Glyma.09G002200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 175680-180679 Glycine max
Glyma.09G002200 5.0kb downstream 5.0kb downstream 8159 true Chr09: 167521-175679 Glycine max
Glyma.09G002200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 167521-172520 Glycine max
Glyma.09G002200 10.0kb upstream 10.0kb upstream 13159 true Chr09: 172521-185679 Glycine max
Glyma.09G002200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 175680-185679 Glycine max
Glyma.09G002200 10.0kb downstream 10.0kb downstream 13159 true Chr09: 162521-175679 Glycine max
Glyma.09G002200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 162521-172520 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310796 5265 Fabidae View MSA
124061836 5270 Rosid View MSA
123744151 5271 Pentapetalae View MSA
122792013 5272 Eudicot View MSA
122048121 5273 Angiosperm View MSA
121348986 5274 Embryophyte View MSA
123381113 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.51971 0.0 16.5533    
cufflinks 5.14032 0.0 18.0131    
cufflinks 3.47197 0.0 13.5202   Low
cufflinks 6.49072 0.0 21.4684    
cufflinks 4.77529 0.0 17.2785    
cufflinks 8.63953 0.0 27.1476   High
cufflinks 4.29962 0.0 16.1358    
cufflinks 5.89135 0.0 19.9831    
cufflinks 5.05886 0.0 17.8443    
cufflinks 2.497       High
cufflinks 0.557       Low
cufflinks 1.571        
cufflinks 1.869        
cufflinks 2.093        
cufflinks 0.284       Low
cufflinks 1.631        
cufflinks 1.359        
cufflinks 2.323        
cufflinks 1.744        
cufflinks 1.571        
cufflinks 0.588       Low
cufflinks 1.892        
cufflinks 1.857        
cufflinks 0.709        
cufflinks 1.573        
cufflinks 0.878        

0 Strain