Gene : Glyma.09G003000 G. max Wm82.a2.v1
Defline:  (1 of 3) PF09133 - SANTA (SANT Associated) (SANTA) Genomic Order:  30
Name:  ? Glyma.09G003000 Secondary Identifier:  ? PAC:30484498
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G003000 0.5kb upstream 0.5kb upstream 1941 true Chr09: 253267-255207 Glycine max
Glyma.09G003000 0.5kb upstream 0.5kb upstream 500 false Chr09: 253267-253766 Glycine max
Glyma.09G003000 0.5kb downstream 0.5kb downstream 1941 true Chr09: 253767-255707 Glycine max
Glyma.09G003000 0.5kb downstream 0.5kb downstream 500 false Chr09: 255208-255707 Glycine max
Glyma.09G003000 1.0kb upstream 1.0kb upstream 2441 true Chr09: 252767-255207 Glycine max
Glyma.09G003000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 252767-253766 Glycine max
Glyma.09G003000 1.0kb downstream 1.0kb downstream 2441 true Chr09: 253767-256207 Glycine max
Glyma.09G003000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 255208-256207 Glycine max
Glyma.09G003000 2.0kb upstream 2.0kb upstream 3441 true Chr09: 251767-255207 Glycine max
Glyma.09G003000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 251767-253766 Glycine max
Glyma.09G003000 2.0kb downstream 2.0kb downstream 3441 true Chr09: 253767-257207 Glycine max
Glyma.09G003000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 255208-257207 Glycine max
Glyma.09G003000 5.0kb upstream 5.0kb upstream 6441 true Chr09: 248767-255207 Glycine max
Glyma.09G003000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 248767-253766 Glycine max
Glyma.09G003000 5.0kb downstream 5.0kb downstream 6441 true Chr09: 253767-260207 Glycine max
Glyma.09G003000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 255208-260207 Glycine max
Glyma.09G003000 10.0kb upstream 10.0kb upstream 11441 true Chr09: 243767-255207 Glycine max
Glyma.09G003000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 243767-253766 Glycine max
Glyma.09G003000 10.0kb downstream 10.0kb downstream 11441 true Chr09: 253767-265207 Glycine max
Glyma.09G003000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 255208-265207 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309998 5265 Fabidae View MSA
124072489 5270 Rosid View MSA
123750067 5271 Pentapetalae View MSA
122795958 5272 Eudicot View MSA
122043476 5273 Angiosperm View MSA
121351771 5274 Embryophyte View MSA
123382314 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.9964 0.0 12.2368    
cufflinks 1.52278 0.0 9.40921    
cufflinks 0.890838 0.0 6.43197   Low
cufflinks 1.38374 0.0 6.0362    
cufflinks 1.65882 0.0 10.5538    
cufflinks 1.21691 0.0 7.96917    
cufflinks 2.56089 0.0 14.6933   High
cufflinks 1.75443 0.0 10.8651    
cufflinks 1.42954 0.0 9.59671    
cufflinks 0.857        
cufflinks 0.894        
cufflinks 0.788        
cufflinks 0.696       Low
cufflinks 0.874        
cufflinks 1.105        
cufflinks 0.961        
cufflinks 0.462       Low
cufflinks 0.811        
cufflinks 0.988        
cufflinks 1.107        
cufflinks 1.506       High
cufflinks 0.927        
cufflinks 1.083        
cufflinks 0.936        
cufflinks 0.905        
cufflinks 1.443       High

0 Strain